Volume 12, Number 6—June 2006
Research
Co-infections of Adenovirus Species in Previously Vaccinated Patients
Gary J. Vora*†1, Baochuan Lin*†1, Kevin Gratwick‡, Carolyn Meador§, Christian Hansen‡, Clark Tibbetts†, David A. Stenger*†, Marina Irvine‡, Donald Seto†¶, Anjan Purkayastha†¶, Nikki E. Freed‡, Marylou G. Gibson#, Kevin Russell†‡, and David Metzgar†‡
Table 4
Human adenovirus (HAdV) species and serotype-specific primers
| Name | Sequence | Target gene | Reference |
|---|---|---|---|
| Primer 1 | CTT GGT CTA CGA CCA GAC GG | ||
| Primer 3 | GTT TGC TCA TGA ACA TGG CCA GAT CGC AC | Species B2 E3 | (26) |
| F30 | CTT CAA CCC TGT CTA CCC TAT GAA | ||
| F969 | TTC TCT AAT GTA GTA AAA GG | HAdV11 fiber | (25) |
| HsgF1 | ATT TCT ATT CCT TCG CG | ||
| HsgF2 | TCA GGC TTG GTA CGG CC | Species F hexon | (24) |
| HsgC1 | ACC TTT GAC TCT TCT GT | ||
| HsgC2 | TCC TTG TAT TTA GTA TC | Species C hexon | (24) |
| Ad3F | GGT AGA GAT GCT GTT GCA GGA | ||
| Ad3R | CCC ATC CAT TAG TGT CAT CGG T | HAdV3 hexon | (23) |
| Ad7F | GGA AAG ACA TTA CTG CAG ACA | ||
| Ad7R | AAT TTC AGG CGA AAA AGC GTC A | HAdV7 hexon | (23) |
| Ad21F | GAA ATT ACA GAC GGC GAA GCC | ||
| Ad21R | AAC CTG CTG GTT TTG CGG TTG | HAdV21 hexon | (23) |
| Ad4F5 | GTT GCT AAC TAC GAT CCA GAT ATT G | ||
| Ad4R4 | CCT GGT AAG TGT CTG TCA ATC C | HAdV4 hexon | This study |
| Ad7F-F | ACA ACT GCC TAT CCT TTC AAT G | ||
| Ad7F-R | GAC CAA GTT ACA CGA ATA CAA TAT G | HAdV7 fiber | This study |
| Ad5 E1A-F1 | CCT AAA ATG GCG CCT GCT ATC CTG | ||
| Ad5 E1A-R1 | GCG ACG CCC ACC AAC TCT CAC | HAdV5 E1A | This study |
| Ad5 E1A-F2 | GAG CCT TGG GTC CGG TTT CTA TG | ||
| Ad5 E1A-R2 | CCA TTT TAG GAC GGC GGG TAG | HAdV5 E1A | This study |
| Ad5 hexon-F1 | GAC GGA GCC AGC ATT AAG TTT GAT | ||
| Ad5 hexon-R1 | GTT GGC GGG TAT AGG GTA GAG CAT | HAdV5 hexon | This study |
| Ad5 fiber-F1 | TAT TCA GCA TCA CCT CCT TTC C | ||
| Ad5 fiber-R1 | AAG CTA TGT GGT GGT GGG GC | HAdV5 fiber | This study |
| AdA1 | GCT GAA GAA MCW GAA GAA AAT GA | ||
| AdA2 | CRT TTG GTC TAG GGT AAG CAC | Species A fiber | (20) |
| AdB1 | TST ACC CYT ATG AAG ATG AAA GC | ||
| AdB2 | GGA TAA GCT GTA GTR CTK GGC AT | Species B fiber | (20) |
| AdC1 | TAT TCA GCA TCA CCT CCT TTC C | ||
| AdC2 | AAG CTA TGT GGT GGT GGG GC | Species C fiber | (20) |
| AdD1 | GAT GTC AAA TTC CTG GTC CAC | ||
| AdD2 | TAC CCG TGC TGG TGT AAA AAT C | Species D fiber | (20) |
| AdE1 | TCC CTA CGA TGC AGA CAA CG | ||
| AdE2 | AGT GCC ATC TAT GCT ATC TCC | Species E fiber | (20) |
| AdF1 | ACT TAA TGC TGA CAC GGG CAC | ||
| AdF2 | TAA TGT TTG TGT TAC TCC GCT C | Species F fiber | (20) |
1These authors contributed equally to this article.
2The members of the Epidemic Outbreak Surveillance Consortium are Peter F. Demitry, Theresa Lynn Difato, Robb K. Rowley, Clark Tibbetts, Eric H. Hanson, Rosana R. Holliday, Curtis White, David A. Stenger, Donald Seto, Elizabeth A. Walter, Jerry Diao, Brian K. Agan, Kevin Russell, David Metzgar, Gary J.Vora, Baochuan Lin, Dzung Thach, Jing Su, Chris Olsen, Dong Xia, John Gomez, John McGraw, Linda Canas, Margaret Jesse, Mi Ha Yuen, Robert Crawford, Sue A. Worthy, Sue Ditty, John McGraw, Michael Jenkins, Zheng Wang, Cheryl J. James, Kathy Ward, Kenya Grant, and Kindra Nix.
