Escherichia coli O157:H7 in Feral Swine near Spinach Fields and Cattle, Central California Coast1
Figure 2. Minimum spanning tree analysis of multilocus variable number tandem repeat analysis (MLVA) data of 76 Escherichia coli O157:H7 strains typed from 47 samples compared with the spinach-related outbreak strain (subtype E). A categorical coefficient and the BURST priority rule of the highest number of single-locus changes were used for the clustering (Bionumerics software version 4.601, Applied Maths, Austin, TX, USA). Circles representing unique MLVA types are designated by an alphanumeric value (Table 2). Numbers between circles represent summed tandem-repeat differences between MLVA types (10). The shaded areas (red, green, and blue) denote genetically related clusters with MLVA differences <3. Red circles indicate types comprising isolates that were indistinguishable from the spinach-related outbreak strain (subtype E) by pulsed-field gel electrophoresis (PFGE).