Skip directly to search Skip directly to A to Z list Skip directly to page options Skip directly to site content

Volume 15, Number 2—February 2009

Dispatch

Genomic Characterization of Novel Human Parechovirus Type

Linlin Li, Joseph Victoria, Amit Kapoor, Asif Naeem, Shahzad Shaukat, Salmaan Sharif, Muhammad Masroor Alam, Mehar Angez, Sohail Zahoor Zaidi, and Eric DelwartComments to Author 
Author affiliations: Blood Systems Research Institute, San Francisco, California, USA (L. Li, J. Victoria, A. Kapoor, E. Delwart); University of California, San Francisco (L. Li, J. Victoria, A. Kapoor, E. Delwart); National Institute of Health, Islamabad, Pakistan (A. Naeem, S. Shaukat, S. Sharif, M.M. Alam, M. Angez, S.Z. Zaidi)

Main Article

Figure 1

Phylogenetic analysis of PAK5045 virus (arrows) and parechovirus strains based on A) the complete amino acid sequence of P1 region and B) the complete amino acid sequence of viral protein 1 (VP1). All parechovirus sequences were obtained from GenBank, including 13 completely sequenced parechoviruses, human parechoviruses (HPeV) 1 Harris (Q66578), HPeV1 BNI-788St (ABK54353), HPeV2 Williamson(CAA06679), HPeV3 A308/99(BAC23086), HPeV3 Can82853-01(CAI64373),HPeV4 K251176-02 (ABC41566), HPeV4 T75-407

Figure 1. Phylogenetic analysis of PAK5045 virus (arrows) and parechovirus strains based on A) the complete amino acid sequence of P1 region and B) the complete amino acid sequence of viral protein 1 (VP1). All parechovirus sequences were obtained from GenBank, including 13 completely sequenced parechoviruses, human parechoviruses (HPeV) 1 Harris (Q66578), HPeV1 BNI-788St (ABK54353), HPeV2 Williamson(CAA06679), HPeV3 A308/99(BAC23086), HPeV3 Can82853-01(CAI64373),HPeV4 K251176-02 (ABC41566), HPeV4 T75-4077 (CAJ84484), HPeV5 CT86-6760 (Q9YID8), HPeV5 T92-15 (CAJ84483),HPeV6 NII561-2000 (BAF63403), HPeV6 2005-823 (ABX79460), HPeV6 BNI-67/03 (ABS82455), Ljungan virus 87-012 (AAM46079), and 17 sequences with accession numbers shown directly on the tree. Both trees were constructed by the neighbor-joining method with 1,000 bootstrap replicates using MEGA4.

Main Article

TOP