Skip directly to search Skip directly to A to Z list Skip directly to site content
CDC Home

Volume 17, Number 10—October 2011

Dispatch

Isolation and Phylogenetic Grouping of Equine Encephalosis Virus in Israel

Karin Aharonson-Raz, Amir Steinman, Velizar Bumbarov, Sushila Maan, Narender Singh Maan, Kyriaki Nomikou, Carrie Batten, Christiaan Potgieter, Yuval Gottlieb, Peter Mertens, and Eyal KlementComments to Author 
Author affiliations: The Hebrew University, Rehovot, Israel (K. Aharonson-Raz, A. Steinman, Y. Gottlieb, E. Klement); Kimron Veterinary Institute, Bet Dagan, Israel (V. Bumbarov); Institute for Animal Health, Pirbright, UK (S. Maan, N.S. Maan, K. Nomikou, C. Batten, P. Mertens); Deltamune (Pty) Ltd, Lyttelton, South Africa (C. Potgieter)

Main Article

Table 2

GenBank accession numbers for orbiviruses used for phylogenic analyses of strain isolated from horses in Israel, 2009*

Virus Strain Accession no.
Seg-2 Seg-10
EEV-1 (Cascara) FLD1 AY115878
FLD2 AY115876
FLD3 AY115875
FLD4 AY115877
Ref AY115865

Ref†

AY115864
EEV-2 (Gamil)
Ref

AY115871
EEV-3 (Kaalplaas) FLD1 AY115874

Ref
HQ630933
AY115867
EEV-4 (Bryanston)
Ref

AY115868
EEV-5 (Kyalami)
Ref

AY115869
EEV-6 (Potchefstroom) Ref AY115866
FLD1 AY115872

FLD2

AY115873
EEV-7 (N Rand)
Ref

AY115870
AHSV-2 AF276700
AHSV-4 AJ007305
AHSV-7


AJ007306
BRDV


M83197
BTV- 2 AF135224
BTV-12


AF135227
PALV (Chuzan)


AB018091
EHDV-1 NC_013405.1
EHDV-2


AM745086.1
Israel EEV H5 Animal H5 HQ441245
Israel EEV H3 Animal H3 (ISR2009/20)‡ JF495411 HQ441246
Israel EEV H8 Animal H8 (ISR2009/21)‡ JF495412 HQ441247

*Seg, dsRNA genome segment; EEV, equine encephalosis virus; FLD, field strain; ref, reference strain; N Rand, North Rand; AHSV, African horse sickness virus; BRDV, Broadhaven virus; BTV, bluetongue virus; PALV, Palyam virus; EHDV, epizootic hemorrhagic disease virus; H5, H3, H8, horses 5, 3, 8.
†Unknown origin.
‡Isolate numbers for the Orbivirus reference collection (www.reoviridae.org/dsRNA_virus_proteins/ReoID/EEV-isolates.htm).

Main Article

Top of Page

USA.gov: The U.S. Government's Official Web PortalDepartment of Health and Human Services
Centers for Disease Control and Prevention   1600 Clifton Rd. Atlanta, GA 30333, USA
800-CDC-INFO (800-232-4636) TTY: (888) 232-6348 - Contact CDC–INFO