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Volume 17, Number 7—July 2011

Research

Asian Lineage of Peste des Petits Ruminants Virus, Africa

Olivier Kwiatek, Yahia Hassan Ali, Intisar Kamil Saeed, Abdelmelik Ibrahim Khalafalla, Osama Ishag Mohamed, Ali Abu Obeida, Magdi Badawi Abdelrahman, Halima Mohamed Osman, Khalid Mohamed Taha, Zakia Abbas, Mehdi El Harrak, Youssef Lhor, Adama Diallo, Renaud Lancelot, Emmanuel Albina, and Geneviève LibeauComments to Author 
Author affiliations: Author affiliations: Control of Exotic and Emerging Animal Diseases, Montpellier, France (O. Kwiatek, R. Lancelot, E. Albina, G. Libeau); Central Veterinary Research Laboratories, Soba, Sudan (Y.H. Ali, I.K. Saeed, M.B. Abdelrahman, H.M. Osman, Z. Abbas); University of Khartoum, Shambat, Sudan (A.I. Khalafalla, A.A. Obeida); Rabak Veterinary Research Laboratory, White Nile State, Sudan (O.I. Mohamed); Atbara Veterinary Research Laboratory, River Nile State, Sudan (K.M. Taha); Biopharama, Rabat, Morocco (M. El Harrak, Y. Lhor); International Atomic Energy Agency, Vienna, Austria (A. Diallo)

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Table 1

Peste des petits ruminant virus (genus Morbillivirus) strains and sequences retrieved from GenBank, Africa, 2000–2009*

Lineage
Origin
Year of isolation
Source
GenBank accession no.
N gene
F gene
I Senegal 1968 ISRA/Senegal DQ840165 NA
III Sudan 1972 CVRL/Sudan DQ840158 NA
II Nigeria 1975 IAH/UK DQ840161 NA
II Nigeria 1975 IAH/UK DQ840162 NA
II Nigeria 1975 IAH/UK; CIRAD/France DQ840160 X74443
II Nigeria 1976 IAH/UK DQ840163 NA
II Nigeria 1976 IAH/UK DQ840164 EU267274
II Ghana 1978 IAH/UK DQ840167 NA
II Ghana 1978 IAH/UK DQ840166 NA
III Oman 1983 IAH/UK DQ840168 NA
III United Arab Emirates 1986 AAZA/UAE DQ840169 NA
I Burkina Faso 1988 CIRAD/France DQ840172 NA
I Guinea 1988 CIRAD/France DQ840170 NA
I Côte d'Ivoire 1989 CIRAD/France DQ840199 EU267273
I Guinea-Bissau 1989 CIRAD/France DQ840171 NA
IV Israel 1993 KVI/Israel DQ840173 NA
I Senegal 1994 ISRA/Senegal DQ840174 NA
III Ethiopia 1994 CIRAD/France DQ840175 NA
IV India 1994 NPRI/India DQ840176 NA
IV India 1994 CIRAD/France DQ840179 NA
IV India 1994 CIRAD/France DQ840180 NA
IV India 1995 CIRAD/France DQ840177 NA
IV India 1995 CIRAD/France DQ840178 NA
IV India 1995 CIRAD/France DQ840182 NA
IV Israel 1995 KVI/Israel DQ840181 NA
III Ethiopia 1996 CIRAD/France DQ840183 NA
IV Turkey 1996 CIRAD/France DQ840184 NA
IV India 1996 IVRI/India AY560591 GQ452015
IV Cameroon 1997 LANAVET/Cameroon HQ131960 NA
IV Iran 1998 CIRAD/France DQ840185 NA
IV Iran 1998 CIRAD/France DQ840186 NA
IV Israel 1998 KVI/Israel DQ840191 NA
IV Israel 1998 KVI/Israel DQ840188 NA
IV Israel 1998 KVI/Israel DQ840189 NA
IV Israel 1998 KVI/Israel DQ840190 NA
II Mali 1999 LCV/Mali DQ840192 NA
IV Saudi Arabia 1999 CIRAD/France DQ840195 NA
IV Saudi Arabia 1999 CIRAD/France DQ840197 NA
IV Tajikistan 2004 CIRAD/France DQ840198 NA
IV Central African Republic 2004 CIRAD/France HQ131962 NA
IV India 2005 CVSH/India DQ267188 DQ267183
IV India 2005 CVSH/India DQ267191 DQ267186
IV India 2005 CVSH/India DQ267192 DQ267187
IV India 2005 CVSH/India DQ267189 DQ267184
IV India 2005 CVSH/India DQ267190 DQ267185
IV China 2007 NEADDC/China EU068731 EU816772
IV China 2007 NEADDC/China EU340363 EU815053
IV Bangladesh 2009 DPBAU/Bangladesh HQ131961 NA
II Senegal 2010 ISRA/Senegal HQ131963 NA
0 Kenya 2010 IAH/UK Z30697 NA

*ISRA, Institut Sénégalais de Recherches Agricoles; NA, GenBank accession no. not available; CVRL, Central Veterinary Research Laboratory; IAH, Institute For Animal Health; CIRAD, Centre de Coopération Internationale en Recherche Agronomique pour le Développement; AAZA, Al Ain Zoo and Aquarium, Al Ain/Abu Dhabi, United Arab Emirates; KVI, Kimron Veterinary Institute; NPRE, National Project on Rinderpest Eradication; IVRI, Indian Veterinary Research Institute; LANAVET, Laboratoire National Veterinaire; LCV, Laboratoire Central Vétérinaire; CVSH, College of Veterinary Science and Husbandry; NEADDC, National Exotic Disease Diagnosis Center; DPBAU, Department of Pathology Bangladesh Agricultural University.

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