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Volume 17, Number 8—August 2011

Research

Novel Human Reovirus Isolated from Children with Acute Necrotizing Encephalopathy

Louise A. Ouattara, Francis Barin, Marie Anne Barthez, Bertrand Bonnaud, Philippe Roingeard, Alain Goudeau, Pierre Castelnau, Guy Vernet, Gláucia Paranhos-BaccalàComments to Author , and Florence Komurian-Pradel
Author affiliations: Author affiliations: Fondation Mérieux, Lyon, France (L.A. Ouattara, G. Vernet, G. Paranhos-Baccalà, F. Komurian-Pradel); Centre Hospitalier Universitaire Bretonneau (F. Barin, P. Roingeard, A. Goudeau); Institut National de la Santé et de la Recherche Médicale U966, Tours, France (F. Barin, P. Roingeard, A. Goudeau); Centre Hospitalier Universitaire, Clocheville, Tours (M.A. Barthez, P. Castelnau); bioMérieux SA, Marcy l’Etoile, France (B. Bonnaud)

Main Article

Table 3

Comparison of S1 and S3 genes of MRV2Tou05, a novel human type 2 reovirus, with the most representative mammalian reovirus strains*

Strain
GenBank accession no.

% Similarity to MRV2Tou05 S1

% Similarity to MRV2Tou05 S3
S1
S3
Nucleotide
Protein
Nucleotide
Protein
T1C50 AY862133 NA 57 50 NA NA
T1N84 AY862136 NA 58 53 NA NA
T1N85 AY862135 U35346 57 51 98 99
T1C11 NA U35359 NA NA 91 98
T1C62 NA U35356 NA NA 91 99
T1C23 AY862134 NA 57 50 NA NA
T2N73 AY862137 U35350 67 66 99 99
T2N84 AY862138 U35347 67 66 98 99
T2W DQ220017 DQ220018 66 62 75 88
T2302II EU049604 NA 83 89 NA NA
T2302I EU049603 NA 83 89 NA NA
BYD1 DQ312301 DQ664191 66 67 84 95
SC-A DQ911244 DQ411553 42 25 91 97
T3Co96 AY302467 NA 43 28 NA NA
T3A L37677 NA 48 25 98 97
T3C18 L37684 NA 42 26 NA NA
T3C8 L37679 U35355 42 24 85 97
T3C31 L37683 NA 41 25 NA NA
T3C9 L37676 U35352 40 25 82 97
T3C93 L37675 NA 42 25 NA NA
T3C44 L37681 NA 42 26 NA NA
T3C45 L37680 NA 42 25 NA NA
T3C43 L37682 NA 42 25 NA NA
T3C84 L37678 U35354 42 25 85 97
T3N83 NA U35349 NA NA 85 98

*S, small segment; NA, not available.

Main Article

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