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Volume 18, Number 11—November 2012

Research

Sources of Dengue Viruses Imported into Queensland, Australia, 2002–2010

David WarrilowComments to Author , Judith A. Northill, and Alyssa T. Pyke
Author affiliations: Queensland Health Forensic and Scientific Services, Archerfield, Queensland, Australia

Main Article

Table 2

Description of DENV virus strains analyzed, Queensland, Australia, 2002–2010*

Serotype/sequence name Geographic origin Year isolated GenBank accession no.
DENV-1

Bali 2003

Bali 2003 JN415488

Bali 2010a

Bali 2010 JN415489

Bali 2010b

Bali 2010 JN415490

Bali 2010c

Bali 2010 JN415491

Bali 2010d

Bali 2010 JN415492

Bali 2010e

Bali 2010 JN415493

Bali 2010f

Bali 2010 JN415494

Cairns 2003

Cairns, Australia 2003 JN415495

Cambodia 2007

Cambodia 2007 JN415496

Cook Islands 2002

Cook Islands 2002 JN415497

Cook Islands 2006

Cook Islands 2006 JN415498

East Timor 2000

Timor-Leste 2000 JN415499

East Timor 2008

Timor-Leste 2008 JN415500

East Timor 2009

Timor-Leste 2009 JN415501

East Timor 2010

Timor-Leste 2010 JN415502

Fiji 2002

Fiji 2002 JN415503

Fiji 2006a

Fiji 2006 JN415504

Fiji 2006b

Fiji 2006 JN415505

Guyana 2008

Guyana 2008 JN415506

India 2008

India 2008 JN415507

India 2010

India 2010 JN415486

Indonesia 2010a

Indonesia 2010 JN415508

Indonesia 2010b

Indonesia 2010 JN415510

Jakarta 2004

Jakarta 2004 AY858983†

Laos 2007

Laos 2007 JN415509

Malaysia 1972

Malaysia 1972 AF425622†

Malaysia 2005

Malaysia 2005 JN415511

Malaysia 2008

Malaysia 2008 JN415512

Malaysia 2010

Malaysia 2010 JN415513

Mareeba 2003

Mareeba, Australia 2003 JN415514

Palau 2000

Palau 2000 JN415515

Philippines 2005

The Philippines 2005 JN415516

Philippines 2010

The Philippines 2010 JN415517

PNG 2003

Papua New Guinea 2003 JN415518

PNG 2009

Papua New Guinea 2009 JN415519

Samoa 2001

Samoa 2001 JN415520

Singapore 2003

Singapore 2003 FJ469907†

Singapore 2005

Singapore 2005 EU081246†

Singapore 2005

Singapore 2005 EU081247†

Singapore 2008

Singapore 2008 JN415521

Solomon Islands 2002

Solomon Islands 2002 JN415522

Southeast Asia 2007

Southeast Asia 2007 JN415523

Southeast Asia 2005

Southeast Asia 2005 JN415529

Sri Lanka 2004

Sri Lanka 2004 JN415524

Sumatra 1998

Sumatra 1998 AB189121†

Thailand 1954

Thailand 1954 D10513†

Thailand 1980

Thailand 1980 AY732474†

Thailand 2001

Thailand 2001 JN415525

Thailand 2008a

Thailand 2008 JN415526

Thailand 2008b

Thailand 2008 JN415527

Thailand 2010

Thailand 2010 JN415528

Tonga 2008

Tonga 2008 JN415530

Townsville 2008

Townsville, Australia 2008 JN415531

Townsville 2009

Townsville, Australia 2009 JN415532

Venezuela 2007

Venezuela 2007 EU482609†

Vietnam 2006

Vietnam 2006 JN415533

Vietnam 2006

Vietnam 2006 EU482818†

Vietnam 2008a

Vietnam 2008 JN415534

Vietnam 2008b

Vietnam 2008 JN415535

Vietnam South 2008

Vietnam 2008 GU131812†

Vietnam 2010

Vietnam 2010 JN415487

Yap Island 2004

Yap Island 2004 AB204803†
DENV-2

Bali 2009

Bali 2009 JN568242

Bali 2010

Bali 2010 JN568243

Borneo 2009

Borneo 2009 JN568247

Brunei 2005

Brunei 2005 EU179858†

Cairns 2003a

Cairns, Australia 2003 JN568248

Cairns 2003b

Cairns, Australia 2003 JN568249

Cairns 2004

Cairns, Australia 2004 JN568250

Cairns 2006

Cairns, Australia 2006 JN568251

Cairns 2008

Cairns, Australia 2008 JN568252

Cairns 2010

Cairns, Australia 2010 JN568253

Cambodia 2003

Cambodia 2003 GQ868621†

Cambodia 2008

Cambodia 2008 GU131924†

China 2001

China 2001 EF051521†

East Timor 2000

Timor-Leste 2000 JN568254

East Timor 2002

Timor-Leste 2002 JN568255

East Timor 2004

Timor-Leste 2004 JN568256

East Timor 2010

Timor-Leste 2010 JN568257

India 2001

India 2001 DQ448237†

India 2009

India 2009 JN568258

India 2003

India 2003 JN568260

India 2010

India 2010 JN568259

Indonesia 2004

Indonesia 2004 AY858035†

Kuranda 2002

Kuranda, Australia 2002 JN568261

Laos 2010

Laos 2010 JN568244

Mt Isa 2010

Mt Isa, Australia 2010 JN568262

New Guinea C 1944

New Guinea 1944 AF038403†

Peru 1996

Peru 1996 IQT1797†

Philippines 2003

The Philippines 2003 JN568263

Philippines 2010a

The Philippines 2010 JN568264

Philippines 2010b

The Philippines 2010 JN568265

PNG 2003

PNG 2003 JN568266

PNG 2009

PNG 2009 JN568241

PNG 2010a

PNG 2010 JN568267

PNG 2010b

PNG 2010 JN568268

PNG 2010c

PNG 2010 JN568269

PNG 2010d

PNG 2010 JN568270

Singapore 2008

Singapore 2008 GU370051†

Southeast Asia 2010b

Southeast Asia 2010 JN568276

Southeast Asia 2010a

Southeast Asia 2010 JN568277

Sri Lanka 1996

Sri Lanka 1996 FJ882602†

Sumatra 2009

Sumatra 2009 JN568271

Sumatra 2010

Sumatra 2010 JN568272

Taiwan 2001

Taiwan 2001 DQ645541†

Thailand 1996

Thailand 1996 AF100459†

Thailand 2001

Thailand 2001 DQ181797†

Thailand 2007

Thailand 2007 JN568273

Thailand 2010a

Thailand 2010 JN568274

Thailand 2010b

Thailand 2010 JN568275

Thailand 2010c

Thailand 2010 JN568245

Torres Strait 2003

Torres Strait, Australia 2003 JN568278

Townsville 1993

Townsville, Australia 1993 AY037116†

Townsville 2010a

Townsville, Australia 2010 JN568279

Townsville 2010b

Townsville, Australia 2010 JN568246

Tully 2010

Tully, Australia 2010 JN568280

Venezuela 1990

Venezuela 1990 GQ868540†

Vietnam 2005

Vietnam 2005 FM210207†

Vietnam 2006

Vietnam 2006 EU569721†

Vietnam 2010a

Vietnam 2010 JN568281

Vietnam 2010b

Vietnam 2010 JN568282
DENV-3

Bali 2009

Bali 2009 JN568284

Bali 2010a

Bali 2010 JN568283

Bali 2010b

Bali 2010 JN575560

Bali 2010c

Bali 2010 JN575561

Cairns 1998

Cairns, Australia 1998 JN575562

Cairns 2008a

Cairns, Australia 2008 JN575563

Cairns 2008

Cairns, Australia 2008 JN575564

Cambodia 2006

Cambodia 2006 JN575565

East Timor 2000

Timor-Leste 2000 JN575566

Fiji 1992

Fiji 1992 L11422†

India 1984

India 1984 L11424†

Indonesia 1985

Indonesia 1985 L11428†

Indonesia 1998

Indonesia 1998 AY265857†

Indonesia 2004a

Indonesia 2004 AY858037†

Indonesia 2004b

Indonesia 2004 AY858047†

Indonesia 2008a

Indonesia 2008 JN575567

Indonesia 2008b

Indonesia 2008 JN575568

Philippines 1983

The Philippines 1983 L11432†

Philippines 1997

The Philippines 1997 AY496879†

Philippines 2010

The Philippines 2010 JN575570

PNG 2008

Papua New Guinea 2008 JN575571

PNG 2010a

Papua New Guinea 2010 JN575572

PNG 2010b

Papua New Guinea 2010 JN575573

Puerto Rico 1977

Puerto Rico 1977 L11434†

Samoa 1986

Samoa 1986 L11435†

Singapore 2005

Singapore 2005 EU081221†

Southeast Asia 2008

Southeast Asia 2008 JN575569

Sri Lanka 1991

Sri Lanka 1991 L11438†

Tahiti 1989

Tahiti 1989 L11619†

Taiwan 1998

Taiwan 1998 DQ675532†

Taiwan 1999

Taiwan 1999 DQ675533†

Thailand 1973

Thailand 1973 L11620†

Thailand 1987

Thailand 1987 L11442†

Thailand 1997a

Thailand 1997 JN575574

Thailand 1997b

Thailand 1997 JN575575

Thailand 2010

Thailand 2010 JN575576

Townsville 2006

Townsville, Australia 2006 JN575577

Townsville 2007

Townsville, Australia 2007 JN575578

Townsville 2009

Townsville, Australia 2009 JN575579

Vietnam 2007

Vietnam 2007 EU482461†

Vietnam 2008

Vietnam 2008 JN575580
DENV-4

Bali 2010

Bali 2010 JN575583

Brazil 1982

Brazil 1982 U18425†

Cairns 2002

Cairns, Australia 2002 JN575584

China 2001

China 2001 AF289029†

Cook Islands 2009

Cook Islands 2009 JN575582

Dominica 1981

Dominica 1981 AF326573†

East Timor 2000

Timor-Leste 2000 JN575585

East Timor 2007

Timor-Leste 2007 JN575586

El Salvador 1983

El Salvador 1983 U18426†

Fiji 2008

Fiji 2008 JN575587

Indonesia 1973

Indonesia 1973 U18428†

Indonesia 1977

Indonesia 1977 U18430†

Indonesia 2010a

Indonesia 2010 JN575588

Indonesia 2010b

Indonesia 2010 JN575589

Innisfail 2009

Innisfail, Australia 2009 JN575581

Jakarta 2004

Jakarta 2004 AY858049†

Malaysia 2009

Malaysia 2009 JN575590

New Caledonia 1984

New Caledonia 1984 U18432†

Philippines 1984

The Philippines 1984 U18435†

Philippines 2004

The Philippines 2004 JN575591

Puerto Rico 1986

Puerto Rico 1986 U18436†

Samoa 2008

Samoa 2008 JN575592

Solomon Islands 2008

Solomon Islands 2008 JN575593

Sri Lanka 1978

Sri Lanka 1978 U18437†

Tahiti 1985

Tahiti 1985 U18439†

Thailand 1978

Thailand 1978 U18441†

Thailand 1984

Thailand 1984 U18442†

Thailand 1997

Thailand 1997 AY618988†

Thailand 2001

Thailand 2001 AY618992†

Thailand 2010

Thailand 2010 JN575594

Torres Strait 2005

Torres Strait, Australia 2005 JN575595

Townsville 2005

Townsville, Australia 2005 JN575596

*DENV, dengue virus; PNG, Papua New Guinea.
†Sequences obtained from GenBank.

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