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Volume 19, Number 10—October 2013

Research

Genetic Recombination and Cryptosporidium hominis Virulent Subtype IbA10G2

Na Li, Lihua Xiao, Vitaliano A. Cama, Ynes Ortega, Robert H. Gilman, Meijin Guo, and Yaoyu FengComments to Author 
Author affiliations: East China University of Science and Technology, Shanghai, China (N. Li, M. Guo, Y. Feng); Centers for Disease Control and Prevention, Atlanta, Georgia, USA (N. Li, L. Xiao, V.A. Cama); University of Georgia, Griffin, Georgia, USA (Y. Ortega); Johns Hopkins University, Baltimore, Maryland, USA (R.H. Gilman)

Main Article

Table 4

Estimates of haplotype diversity in IbA10G2subtype and non-IbA10G2 subtypes of Cryptosporidium hominis and comparison of 2 populations at each locus by pairwise FST analysis*

No. Locus Haplotype diversity
Population pairwise FST p value ± SEM
IbA10G2 subtype Non-IbA10G2 subtypes
1 CP56 0.5200 0.4615 −0.03454 0.88867 ± 0.0104
2 MSC6–7 0.3692 0.5527 0.07491 0.10156 ± 0.0074
3 C6–60 0.9231 0.9145 0.00922 0.21387 ± 0.0105
4 C6–160 0.6738 0.6667 0.00735 0.31738 ± 0.0131
5 C6–230 0.3846 0.5670 0.05070 0.07422 ± 0.0069
6 C6–280 0.4092 0.6553 0.06300 0.06836 ± 0.0076
7 C6–350 0.4092 0.4330 −0.03736 0.99902 ± 0.0002
8 C6–580 0.0000 0.4274 0.17205 0.00781 ± 0.0028†
9 C6–740 0.4646 0.6695 0.03343 0.12891 ± 0.0126
10 C6–830′ 0.0000 0.3134 0.15031 0.04883 ± 0.0067‡
11 C6–1000′ 0.0000 0.6154 0.30288 0.00000 ± 0.0000§
12 gp60 0.0000 0.7835 0.60340 0.00000 ± 0.0000§
13 C6–1420 0.0000 0.3732 0.15665 0.02051 ± 0.0038‡
14 CP47 0.6800 0.7721 0.18033 0.00000 ± 0.0000§
15 C6–2600 0.0769 0.5014 0.29888 0.00098 ± 0.0010§
16 C6–2970 0.3692 0.3590 −0.03901 0.99902 ± 0.0002
17 C6–3110’ 0.0000 0.0741 −0.00143 0.99902 ± 0.0002
18 C6–3520 0.0769 0.5185 0.42036 0.00000 ± 0.0000§
19 C6–3520’ 0.0769 0.0000 0.00148 0.48535 ± 0.0148
20 C6–3690 0.4431 0.5014 −0.01700 0.55859 ± 0.0145
21 DZ-HRGP 0.0000 0.3134 0.15031 0.03809 ± 0.0056‡
22 C6–4110 0.4646 0.3134 0.10817 0.01855 ± 0.0048‡
23 C6–5110’ 0.0769 0.3989 0.17072 0.00781 ± 0.0028†
24 C6–5120 0.0769 0.3989 0.14126 0.05664 ± 0.0066
25 C6–5410 0.5569 0.5014 −0.02614 0.67383 ± 0.0182

*FST, population differentiation.
†p<0.01.
‡p<0.05.
§p<0.001.

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