Volume 19, Number 2—February 2013
Research
Phylogenetic and Ecologic Perspectives of a Monkeypox Outbreak, Southern Sudan, 2005
Table 1
Virus isolates included in the phylogenetic analysis.of monkeypox outbreak, southern Sudan, 2005*
| Isolate | Isolate no. | Source | GenBank accession no. | Clade |
|---|---|---|---|---|
| Copenhagen 1958 | 1 | Cynomolgus monkey/laboratory | AY753185 | West African |
| Walter Reed 1961 | 2 | Cynomolgus monkey/laboratory | AY603973 | West African |
| Liberia 1970 | 3 | Human/wild | DQ011156 | West African |
| Sierra Leone 1970 | 4 | Human/wild | AY741551 | West African |
| USA/Ghana 2003_039 | 5 | Human/wild | DQ011157 | West African |
| USA/Ghana 2003_044 | 6 | Prairie dog/wild | DQ011153 | West African |
| Impfondo RoC 2003 | 7 | Human/wild | DQ011154 | Congo Basin |
| Mindembo Zaire 1979 | 8 | Human/wild | DQ011155 | Congo Basin |
| Nuria Sudan 2005 | 9 | Human/wild | KC257459 | Congo Basin |
| Yandongi DRC 1986 | 10 | Human/wild | KC257460 | Congo Basin |
| Sankuru Zaire 1996 | 11 | Human/wild | NC_003310 | Congo Basin |
*DRC, Democratic Republic of Congo.


