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Volume 9, Number 3—March 2003

Research

New Lyssavirus Genotype from the Lesser Mouse-eared Bat (Myotis blythi), Kyrghyzstan

Yohko T. Arai*Comments to Author , Ivan V. Kuzmin†, Yosuke Kameoka*, and Alexandr D. Botvinkin‡
Author affiliations: *National Institute of Infectious Diseases, Tokyo, Japan; †Institute for Natural Foci Infections, Omsk, Russia; ‡Antiplague Research Institute of Siberia and the Far East, Irkutsk, Russia

Main Article

Table 2

Comparison of nucleotide and deduced amino acid sequences of Aravan virus with other 13 lyssaviruses

Amino acid sequence identity (%) Nucleotide sequence identity (%)

Genotype 1 (rabies virus)
Genotype 2
Genotype 3
Genotype 4
Genotype 5
Genotype 6
Genotype 7
Aravan SRL1032 U22479BRE U22628AFS U22644CHAD U22653THA AF351850 U27221 LBU22842 MKU22843 86132AS 8918FRA 9007FIN AF006497
Aravan
100.0
75.6
76.0
76.2
74.8
75.9
77.0
76.2
74.3
72.4
78.2
77.9
77.2
76.9
SRL1032
90.9
100.0
84.7
85.9
86.9
86.8
86.6
84.1
74.2
70.2
73.9
75.6
74.7
78.0
U22479BRE
88.2
95.3
100.0
83.3
83.0a
83.3
89.9
83.7
73.8
69.6
73.8
75.3
74.2
77.2
U22628AFS
89.3
96.7
93.3b
100.0
85.6
83.5
83.6
83.2
73.3
70.4
73.9
75.3
74.6
78.0
U22644CHAD
88.7
96.9
93.1 b
94.4
100.0
86.0
84.0
82.9a
73.0
69.0
73.1
75.0
74.8
77.2
U22653THA
89.8
97.1
94.2
95.1
95.3
100.0
84.2
82.8a
73.4
69.7
74.4
75.9
74.7
77.3
AF351850
90.0
97.1
95.8
95.8
94.9
95.6
100.0
86.1
73.5
70.1
74.3
75.0
74.8
77.4
U27221
89.6
95.8
93.6
94.2
93.8
94.9
95.1
100.0
73.1
70.2
74.2
74.6
75.7
77.1
LBU22842
84.7
82.9
81.8
81.1
80.4
81.8
83.1
82.2
100.0
74.8
73.4
74.4
72.5
72.6
MKU22843
80.9
78.2
77.6
77.3
76.2
77.6
78.4
77.8
84.4
100.0
71.6
69.9
69.2
71.0
86132AS
91.8
88.9
86.9
87.6
87.1
87.6
88.7
87.8
85.8
80.7
100.0
79.8c
75.9
77.0
8918FRA
92.0
88.9
86.7
87.8
87.8
88.4
88.2
88.2
83.8
79.1
93.3d
100.0
78.0
76.9
9007FIN
88.9
88.0
86.2
87.1
86.9
88.0
87.3
87.3
79.1
76.2
86.2
88.0
100.0
77.2
AF006497 92.0 93.1d 91.1 91.6 91.1 91.8 91.8 91.3 82.0 79.8 90.0 89.8 87.8 100.0

aThe values were shown as maximum variation of nucleotide sequence identities (%) within genotype 1.
bThe values were shown as maximum variation of amino acid sequence identities (%) within genotype 1.
cThresholds of nucleotide sequence identities % as different genotypes.
dThresholds of amino acid sequence identities % as different genotypes.

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