Volume 14, Number 10—October 2008
Dispatch
Extended Sequence Typing of Campylobacter spp., United Kingdom
Kate E. Dingle, Noel D. McCarthy, Alison J. Cody, Tim E.A. Peto, and Martin C. J. Maiden
Table
Temporal association of genotypically identical isolates of Campylobacter spp., United Kingdom*
| ST | 10-locus genotype |
No. isolates | p value of temporal association | ||
|---|---|---|---|---|---|
| flaA SVR | flab SVR | porA | |||
| 49 | 11 | 11 | 53 | 5 | 0.0005 |
| 206 | 14 | 96 | 7 | 5 | 0.36 |
| 583 | 239 | 177 | 43 | 5 | 0.85 |
| 45 | 8 | 8 | 44 | 6 | 0.92 |
| 48 | 32 | 103 | 14 | 6 | 0.44 |
| 354 | 18 | 18 | 57 | 6 | 0.42 |
| 51 | 21 | 21 | 10 | 7 | 0.0007 |
| 475 | 105 | 105 | 67 | 7 | 0.16 |
| 50 | 36 | 36 | 6 | 8 | 0.35 |
| 827 | 255 | 236 | 33 | 8 | 0.49 |
| 19 | 36 | 36 | 7 | 9 | 0.15 |
| 658 | 5 | 5 | 25 | 9 | 0.19 |
| 104 | 36 | 36 | 14 | 11 | 0.14 |
| 574 | 105 | 105 | 1 | 12 | <0.0001 |
| 51 | 316 | 295 | 10 | 13 | <0.0001 |
| 257 | 16 | 301 | 1 | 34 | <0.0001 |
*ST, sequence type; SVR, short variable region.
