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Volume 14, Number 7—July 2008

Research

Wide Distribution of a High-Virulence Borrelia burgdorferi Clone in Europe and North America

Wei-Gang Qiu*Comments to Author , John F. Bruno†, William D. McCaig*, Yun Xu†, Ian Livey‡, Martin E. Schriefer§, and Benjamin J. Luft†
Author affiliations: *Hunter College of the City University of New York, New York, New York, USA; †Stony Brook University, Stony Brook, New York, USA; ‡Baxter Innovations GmBH, Orth/Donau, Austria; §Centers for Disease Control and Prevention, Fort Collins, Colorado, USA;

Main Article

Figure 1

Gene trees showing nucleotide sequence clusters of 68 Borrelia burgdorferi isolates at 1 chromosomal locus (panel A: rrs-rrlA spacer, or intergenic spacer [IGS]) and 3 plasmid loci (panels B, C, and D: ospC on cp26, dbpA on lp54, and BBD14 on lp17, respectively). Trees were inferred based on nucleotide sequence alignments and were rooted by using the Ri5, SV1, or both, sequences as outgroups. The DNADIST and neighbor-joining programs of the PHYLIP package (33) were used for distance calculation and the APE software package (34) was used for tree plotting. Isolates were grouped as clonal groups (A through U), which are named by their typical ospC alleles. Five isolates (Bol26, VS219, MI409, MI415, and MI418) showing atypical allelic associations with ospC alleles, likely caused by recombination, were labeled in orange. Red, European isolates; blue, northeastern US isolates; green, midwestern US isolates. Scale bars indicate number of nucleotide substitutions per site.

Figure 1. Gene trees showing nucleotide sequence clusters of 68 Borrelia burgdorferi isolates at 1 chromosomal locus (panel A: rrs-rrlA spacer, or intergenic spacer [IGS]) and 3 plasmid loci (panels B, C, and D: ospC on cp26, dbpA on lp54, and BBD14 on lp17, respectively). Trees were inferred based on nucleotide sequence alignments and were rooted by using the Ri5, SV1, or both, sequences as outgroups. The DNADIST and neighbor-joining programs of the PHYLIP package (33) were used for distance calculation and the APE software package (34) was used for tree plotting. Isolates were grouped as clonal groups (A through U), which are named by their typical ospC alleles. Five isolates (Bol26, VS219, MI409, MI415, and MI418) showing atypical allelic associations with ospC alleles, likely caused by recombination, were labeled in orange. Red, European isolates; blue, northeastern US isolates; green, midwestern US isolates. Scale bars indicate number of nucleotide substitutions per site.

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