Volume 15, Number 1—January 2009
Dispatch
Enterovirus 71 Outbreak, Brunei
Sazaly AbuBakar
, I-Ching Sam, Jaliha Yusof, Meng Keang Lim, Suzana Misbah, Poh-Sim Hooi, and NorAziyah MatRahim
, I-Ching Sam, Jaliha Yusof, Meng Keang Lim, Suzana Misbah, Poh-Sim Hooi, and NorAziyah MatRahimTable 2
Reference enterovirus 71 sequences used for phylogenetic analysis*
| Isolate | GenBank accession no. | Subgenogroup | Origin | Year | Clinical details | Reference |
|---|---|---|---|---|---|---|
| BrCr-CA-70 | U22521 | A | USA | 1970 | Encephalitis | (11) |
| S11051-SAR-98 | AF376081 | C1 | Sarawak | 1998 | HFMD | (6) |
| 1M-AUS-12-00 | AF376098 | C1 | Australia | 2000 | HFMD | (6) |
| 2M-AUS-3-99 | AF376103 | C2 | Australia | 1999 | Myelitis | (6) |
| 2644-AUS-95 | AF135949 | C2 | Australia | 1995 | NA | (11) |
| KOR-EV71-09 | AY125973 | C3 | South Korea | 2000 | NA | UD |
| KOR-EV71-10 | AY125974 | C3 | South Korea | 2000 | NA | UD |
| F2-CHN-00 | AB115491 | C4 | China | 2000 | NA | UD |
| H26-CHN-00 | AB115493 | C4 | China | 2000 | NA | UD |
| 1091S/VNM/05 | AM490143 | C5 | Vietnam | 2005 | NA | (10) |
| 999T/VNM/05 | AM490163 | C5 | Vietnam | 2005 | NA | (10) |
| 2609-AUS-74 | AF135886 | B1 | Australia | 1974 | Meningitis | (11) |
| 2258-CA-79 | AF135880 | B1 | USA | 1979 | Tremors | (11) |
| 7673-CT-87 | AF009535 | B2 | USA | 1987 | NA | (11) |
| 2222-IA-88 | AF009540 | B2 | USA | 1988 | Fever | (11) |
| MY104-9-SAR-97 | AF376072 | B3 | Sarawak | 1997 | Cardiogenic shock | (6) |
| 26M-AUS-2-99 | AF376101 | B3 | Australia | 1999 | HFMD | (6) |
| 1067-Yamagata-00 | AB213625 | B4 | Japan | 2000 | HFMD | (8) |
| 2027-SIN-01 | AF376111 | B4 | Singapore | 1997 | Acute flaccid paralysis | (6) |
| CN04104-SAR-00 | AF376067 | B4 | Sarawak | 2000 | HFMD | (6) |
| 5511-SIN-00 | AF376121 | B5 | Singapore | 2000 | HFMD | (6) |
| 2716-Yamagata-03 | AB177816 | B5 | Japan | 2003 | HFMD | (8) |
| 2419-Yamagata-03 | AB213647 | B5 | Japan | 2003 | HFMD | (8) |
| S19841-SAR-03 | AY258310 | B5 | Sarawak | 2003 | NA | UD |
| SB12869-SAR-03 | AY905545 | B5 | Sarawak | 2003 | NA | (3) |
*HFMD, hand, foot, and mouth disease; NA, not available; UD, unpub. data.
