Volume 15, Number 1—January 2009
Dispatch
Hepatitis E Virus Genotype 3 Diversity, France
Florence Legrand-Abravanel, Jean-Michel Mansuy, Martine Dubois, Nassim Kamar, Jean-Marie Peron, Lionel Rostaing, and Jacques Izopet
Table 1
Primers used to amplify the whole hepatitis E virus genotype 3f genome
| Fragment size, bp | Nucleotide position* | Sense primers (5′ → 3′) | Antisense primers (5′ → 3′) |
|---|---|---|---|
| 990 | 1–990 | TAGGCAGACCACGTATGTGGTCGATGCCATGGA | gccggtcccagatRtgSaccggRa |
| 1,294 | 878–2172 | ACAGAGGTGTATGTTAGATCCATATTTGGC | GGGGAGAAGTCGCTAGAGAAACCTGATGT |
| 2568 | 2001–4569 | CCCAGCGSCWTTCGCTGACCGG | CGGATAAGCCACTGGGGCATGCCRCACT |
| 736 | 4542–5278 | AGTGYGGCATGCCCCAGTGGCTTATCCG | GCCGGTGGCGCGGGCAGCATAGGCA |
| 1,480 | 5003–6484 | ACGAATGTYGCGCAGGTYTGTGT | cccttrtcctgctgngcattctcgacaga |
| 964 | 6363–7327 | GACAGAATTRATTTCGTCGGC | TTTCCMGGGRGCGCGGAACCCCGAA |
*Nucleotide position refers to Burma strain, M73218.
