Volume 16, Number 1—January 2010
Research
Severe Pneumonia Associated with Pandemic (H1N1) 2009 Outbreak, San Luis Potosí, Mexico
Table 1
Oligonucleotide primers used for the subtyping of type A influenza viruses, Mexico
| Oligonucleotide | Sequence (5′ → 3′) | Amplicon, bp | Reference |
|---|---|---|---|
| UniFlu-RT | AGC-AAA-AGC-AGG | Full genomic | (10) |
| HA1-F | GAA-ATT-TGC-TAT-GGC-TGA-CGG-GR | 171 | This study |
| HA1-R | GAC-ACT-ACA-GAG-ACA-TAA-GCA-TTT-TC | (11) | |
| HA3-F | CAG-CAA-AGC-CTA-CAG-CAA-MTG-TT | 236 | This study |
| HA3-R | GGC-ATA-GTC-ACG-TTC-AAT-GCT-G | (11) | |
| HA5-F | AAA-CTC-CAA-TRG-GGG-CGA-TAA-AC | 344 | This study |
| HA5-R1 | CAA-CGG-CCT-CAA-ACT-GAG-TGT | (11) | |
| HA5-R2 | CCA-ACA-GCC-TCA-AAC-TGA-GTG-T | This study | |
| NA1Nw-F | ACT-CAR-GAG-TCT-GAA-TGT-G | 409 | This study |
| NA1Nw-R1 | GTC-CTT-CCT-ATC-CAA-ACA-CC | ||
| NA1Nw-R2 | GTT-CTC-CCG-AGC-CAG-ATA-CC | ||
| NA2-F1 | GGA-AAA-TCG-TTC-ATA-CTA-GCA-MAT-TG | 176 | This study |
| NA2-F2 | GGG-AAA-ATC-GTT-CAT-ATT-AGC-ACA-TTG | (11) | |
| N2-R1 | AGC-ACA-CAT-AWC-TGG-AAA-CAA-TGC | This study |


