Variegated Squirrel Bornavirus 1 in Squirrels, Germany and the Netherlands
Kore Schlottau, Maria Jenckel, Judith van den Brand, Christine Fast, Christiane Herden, Dirk Höper, Timo Homeier-Bachmann, Jens Thielebein, Niels Mensing, Bert Diender, Donata Hoffmann, Rainer G. Ulrich, Thomas C. Mettenleiter, Marion Koopmans, Dennis Tappe, Jonas Schmidt-Chanasit, Chantal B.E.M. Reusken, Martin Beer
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, and Bernd Hoffmann
Author affiliations: Friedrich-Loeffler-Institut, Greifswald-Insel Riems, Germany (K. Schlottau, M. Jenckel, C. Fast, D. Höper, T. Homeier-Bachmann, D. Hoffmann, R.G. Ulrich, T.C. Mettenleiter, M. Beer, B. Hoffmann); Erasmus Medical Center, Rotterdam, the Netherlands (J. van den Brand, M. Koopmans, C.B.E.M. Reusken); Justus-Liebig University Gießen, Gießen, Germany (C. Herden); Martin Luther University Halle-Wittenberg, Halle, Germany (J. Thielebein); Tierarztpraxis Dr. Niels Mensing, Magdeburg, Germany (N. Mensing); Dierenartspraktijk Diender, Vlissingen, the Netherlands (B. Diender); Bernhard Nocht Institute for Tropical Medicine, Hamburg, Germany (D. Tappe, J. Schmidt-Chanasit)
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Figure 2
Figure 2. Analysis of 11 newly identified VSBV-1 genomes from squirrels collected in Germany and the Netherlands, 2015, in comparison with related bornaviruses. A) New sequences aligned with published squirrel-derived VSBV-1 genome (GenBank accession no. LN713680). The upper black bar indicates the reference sequence; gray boxes depict the genome. White bar sections for each animal sequence indicate nucleotide variations. The new sequences show 1–29 nucleotide differences compared to the published prototype sequence. G, glycoprotein; L, large structural protein; M, matrix; N, nucleoprotein; P, phosphoprotein; X, nonstructural protein. B) Phylogenetic tree of VSBV-1 isolates from this study (labeled) and comparison sequences. Tree was constructed using the maximum-likelihood method. Numbers along branches are bootstrap values. GER, Germany; NL, the Netherlands; VSBV-1, variegated squirrel bornavirus 1.
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