Articles from Emerging Infectious Diseases
Volume 32, Number 5—May 2026
Synopses
Borna Disease Virus 1 as Cause of Fatal Meningoencephalomyelitis in Wild Hedgehogs, Germany, 2022–2025
Borna disease virus 1 (BoDV-1) causes encephalitis with a fatality rate of >90% in domestic mammals and humans. Currently, the bicolored white-toothed shrew is the only known reservoir host. We report BoDV-1 infections in 15 wild European hedgehogs from an endemic area in Germany. Because hedgehogs are distant relatives of shrews and often cared for by humans, the cases raise concern regarding a potential zoonotic risk. All the hedgehogs that tested positive for BoDV-1 died of neurological disease and exhibited severe polio-predominant lymphoplasmohistiocytic meningoencephalitis. However, because of the detection of viral antigens in nonneural cells in 1 animal, we cannot completely exclude that some infected hedgehogs shed the virus. Although direct BoDV-1 transmission is known to be inefficient, our results emphasize the necessity of hygiene measures when handling hedgehogs, especially those with neurological signs who are from BoDV-1–endemic regions.
| EID | Michelakaki E, Schade B, Boehm B, Kappe E, Suchowski M, Kupca A, et al. Borna Disease Virus 1 as Cause of Fatal Meningoencephalomyelitis in Wild Hedgehogs, Germany, 2022–2025. Emerg Infect Dis. 2026;32(5):675-686. https://doi.org/10.3201/eid3205.250952 |
|---|---|
| AMA | Michelakaki E, Schade B, Boehm B, et al. Borna Disease Virus 1 as Cause of Fatal Meningoencephalomyelitis in Wild Hedgehogs, Germany, 2022–2025. Emerging Infectious Diseases. 2026;32(5):675-686. doi:10.3201/eid3205.250952. |
| APA | Michelakaki, E., Schade, B., Boehm, B., Kappe, E., Suchowski, M., Kupca, A....Matiasek, K. (2026). Borna Disease Virus 1 as Cause of Fatal Meningoencephalomyelitis in Wild Hedgehogs, Germany, 2022–2025. Emerging Infectious Diseases, 32(5), 675-686. https://doi.org/10.3201/eid3205.250952. |
Three Fatal Gestational Psittacosis Cases Caused by Chlamydia psittaci Strains Belonging to Closely Related Lineages, Japan
Gestational psittacosis is a rare infectious disease caused by Chlamydia psittaci that causes high maternal and fetal mortality rates. In Japan, gestational psittacosis has been reported in 7 patients, including 4 maternal deaths without antemortem diagnosis. We molecularly diagnosed C. psittaci infection postmortem in 3 patients treated during 2017–2024. We extracted DNA from formalin-fixed paraffin-embedded placenta, lung, and spleen tissues. Analysis of multilocus sequence typing indicated sequence type (ST) 269 in 1 patient and ST335 in 2; all 3 were closely related lineages that have not been previously reported in Japan or in animals. However, the ompA gene showed distinct clusters in the phylogenetic analysis. Quantitative PCR and immunostaining revealed higher amounts of C. psittaci detected in placenta than in lung or spleen, suggesting that proliferation of C. psittaci in the placenta might cause severe symptoms. ST335/ST269 lineage could be highly virulent strains for pregnant women.
| EID | Nishino A, Nakura Y, Sassa-O’Brien Y, Soeda M, Sugii H, Shimizu K, et al. Three Fatal Gestational Psittacosis Cases Caused by Chlamydia psittaci Strains Belonging to Closely Related Lineages, Japan. Emerg Infect Dis. 2026;32(5):687-696. https://doi.org/10.3201/eid3205.252008 |
|---|---|
| AMA | Nishino A, Nakura Y, Sassa-O’Brien Y, et al. Three Fatal Gestational Psittacosis Cases Caused by Chlamydia psittaci Strains Belonging to Closely Related Lineages, Japan. Emerging Infectious Diseases. 2026;32(5):687-696. doi:10.3201/eid3205.252008. |
| APA | Nishino, A., Nakura, Y., Sassa-O’Brien, Y., Soeda, M., Sugii, H., Shimizu, K....Yanagihara, I. (2026). Three Fatal Gestational Psittacosis Cases Caused by Chlamydia psittaci Strains Belonging to Closely Related Lineages, Japan. Emerging Infectious Diseases, 32(5), 687-696. https://doi.org/10.3201/eid3205.252008. |
Research
Diagnosis of coccidioidomycosis is challenging and requires a high index of clinical suspicion. We estimated the incidence and duration of, and risk factors associated with, diagnostic delays and missed opportunities in the diagnosis of coccidioidomycosis. We conducted a retrospective analysis of health insurance claims data in the United States during 2001–2022 included in the Merative MarketScan Databases. Using a case-crossover design and a bootstrapping approach, we estimated the number of excess visits for coccidioidomycosis-related symptoms before diagnosis. We also evaluated potential factors associated with delay. We estimated that almost 60% of patients experienced >1 missed opportunity for diagnosis; the average diagnostic delay was 29.69 (95% CI 28.25–31.18) days. Missed opportunities were predominantly observed in outpatient settings (73%) and were significantly associated with older age, rural residence, underlying pulmonary conditions, and prescriptions for antibiotics or inhalers. Diagnostic delays for coccidioidomycosis are common, and addressing such delays could improve clinical outcomes.
| EID | Barber DD, Arakkal AT, Thompson GR, Baddley JW, Cavanaugh JE, Miller AC, et al. Frequency and Duration of Diagnostic Delays Associated with Coccidioidomycosis and Risk Factors for Missed Diagnoses, United States. Emerg Infect Dis. 2026;32(5):697-706. https://doi.org/10.3201/eid3205.251421 |
|---|---|
| AMA | Barber DD, Arakkal AT, Thompson GR, et al. Frequency and Duration of Diagnostic Delays Associated with Coccidioidomycosis and Risk Factors for Missed Diagnoses, United States. Emerging Infectious Diseases. 2026;32(5):697-706. doi:10.3201/eid3205.251421. |
| APA | Barber, D. D., Arakkal, A. T., Thompson, G. R., Baddley, J. W., Cavanaugh, J. E., Miller, A. C....Polgreen, P. M. (2026). Frequency and Duration of Diagnostic Delays Associated with Coccidioidomycosis and Risk Factors for Missed Diagnoses, United States. Emerging Infectious Diseases, 32(5), 697-706. https://doi.org/10.3201/eid3205.251421. |
Zoonotic and Anthroponotic Plasmodium spp. Circulation between Wild Primates and Indigenous Community, Peruvian Amazon, 2007–2020
Malaria transmission at the human–wildlife interface remains poorly characterized in the Amazon. We conducted a molecular survey of Plasmodium spp. in an Indigenous community (n = 141) and sympatric nonhuman primates (NHPs) (n = 341; 10 species) in the Peruvian Amazon during 2007–2020. By using nested or quantitative PCR (targeting cytb, cox3, and 18S rRNA genes) and sequencing, we estimated prevalence, parasite load, and genetic similarity. We detected Plasmodium in 43.3% of humans and 51.9% of NHPs. P. vivax/simium predominated in humans (42.1%), whereas P. brasilianum/malariae predominated in NHPs (24.6%). P. falciparum was rare in both hosts. Children <8 years of age showed higher parasite load than older persons. Bayesian phylogenies revealed >99.9% identity among human and NHP lineages, supporting shared Plasmodium lineages. NHP lineages showed low interannual variation. One third of human infections were asymptomatic. Our findings reveal hidden reservoirs and support integrating wildlife surveillance into Amazon malaria elimination strategies.
| EID | Ulloa GM, Greenwood AD, Cornejo OE, Alonso H, Santolalla Robles ML, Montero S, et al. Zoonotic and Anthroponotic Plasmodium spp. Circulation between Wild Primates and Indigenous Community, Peruvian Amazon, 2007–2020. Emerg Infect Dis. 2026;32(5):707-709. https://doi.org/10.3201/eid3205.251695 |
|---|---|
| AMA | Ulloa GM, Greenwood AD, Cornejo OE, et al. Zoonotic and Anthroponotic Plasmodium spp. Circulation between Wild Primates and Indigenous Community, Peruvian Amazon, 2007–2020. Emerging Infectious Diseases. 2026;32(5):707-709. doi:10.3201/eid3205.251695. |
| APA | Ulloa, G. M., Greenwood, A. D., Cornejo, O. E., Alonso, H., Santolalla Robles, M. L., Montero, S....Mayor, P. (2026). Zoonotic and Anthroponotic Plasmodium spp. Circulation between Wild Primates and Indigenous Community, Peruvian Amazon, 2007–2020. Emerging Infectious Diseases, 32(5), 707-709. https://doi.org/10.3201/eid3205.251695. |
Investigation of and Response to Autochthonous Dengue, Los Angeles County, California, USA, August–November 2024
Dengue is not endemic in the continental United States; most cases occur in returning travelers. During August–November 2024, a total of 14 locally acquired cases of dengue were identified in Los Angeles County, California, USA. Epidemiologic evidence indicates that locally acquired cases occurred in several neighborhoods, suggesting short transmission chains after introductions from returning travelers. In one neighborhood, evidence supported ongoing transmission for up to 7 weeks. Median patient age was 54 (range 5–79) years; 8 (57%) patients were female and 6 (43%) male, and 6 (43%) required hospitalization. Delays in healthcare seeking and diagnoses were noted; median time from symptom onset to specimen collection for dengue testing was 9 (range 2–34) days. Local dengue transmission in Los Angeles County highlights the emerging threat of mosquitoborne disease transmission in nonendemic areas and the need for rapid and coordinated public health and vector control responses to interrupt transmission.
| EID | Vaughan AM, Park C, Ngo VP, Contreras ZA, Lee J, Danza P, et al. Investigation of and Response to Autochthonous Dengue, Los Angeles County, California, USA, August–November 2024. Emerg Infect Dis. 2026;32(5):720-727. https://doi.org/10.3201/eid3205.251812 |
|---|---|
| AMA | Vaughan AM, Park C, Ngo VP, et al. Investigation of and Response to Autochthonous Dengue, Los Angeles County, California, USA, August–November 2024. Emerging Infectious Diseases. 2026;32(5):720-727. doi:10.3201/eid3205.251812. |
| APA | Vaughan, A. M., Park, C., Ngo, V. P., Contreras, Z. A., Lee, J., Danza, P....Halai, U. (2026). Investigation of and Response to Autochthonous Dengue, Los Angeles County, California, USA, August–November 2024. Emerging Infectious Diseases, 32(5), 720-727. https://doi.org/10.3201/eid3205.251812. |
Updated Genomic Epidemiologic Description of Candida (Candidozyma) auris, United States
The multidrug-resistant yeast Candida (Candidozyma) auris has caused several healthcare-associated outbreaks in the United States. We provide a genomic epidemiologic description of 1,535 C. auris isolates collected in the United States during 2013–2022. We identified clades I, II, III, and IV but not clades V or VI. Median pairwise single-nucleotide polymorphism distances indicated lower intraclade relatedness for clades I (91), III (43), and IV (43), compared with clade II (1,455). Phylogenetic analysis showed regional clusters with varying predominant clades. Of 809 isolates that underwent antifungal susceptibility testing, 53 were echinocandin resistant, distributed across 3 clades; 92% (49/53) had FKS1 hotspot mutations, which varied regionally. Our findings corroborate ongoing transmission and clonal expansion of C. auris, likely propagated by multiple introductions within and between geographic regions. Echinocandin resistance in multiple clades highlights the need to increase awareness, improve treatment practices, and engage in rapid public health response.
| EID | Parnell LA, Dos Santos A, Forsberg K, Lyman M, Misas E, Gade L, et al. Updated Genomic Epidemiologic Description of Candida (Candidozyma) auris, United States. Emerg Infect Dis. 2026;32(5):728-739. https://doi.org/10.3201/eid3205.250760 |
|---|---|
| AMA | Parnell LA, Dos Santos A, Forsberg K, et al. Updated Genomic Epidemiologic Description of Candida (Candidozyma) auris, United States. Emerging Infectious Diseases. 2026;32(5):728-739. doi:10.3201/eid3205.250760. |
| APA | Parnell, L. A., Dos Santos, A., Forsberg, K., Lyman, M., Misas, E., Gade, L....Chow, N. A. (2026). Updated Genomic Epidemiologic Description of Candida (Candidozyma) auris, United States. Emerging Infectious Diseases, 32(5), 728-739. https://doi.org/10.3201/eid3205.250760. |
Dispatches
Retrospective Phylogenetic Analysis of Mayaro Virus, French Guiana, 1996–2024
We conducted a retrospective phylogenetic analysis of Mayaro virus (MAYV) detected in French Guiana during 1996–2024. Analysis revealed circulation of MAYV genotype D sublineage 2 and suggested introduction from Brazil and spread to Haiti and Venezuela. Phylogenetic findings support endemic circulation and reinforce the need for MAYV surveillance in the region.
| EID | Lagrave A, Enfissi A, Tirera S, Epelboin L, Duchemin J, Succo T, et al. Retrospective Phylogenetic Analysis of Mayaro Virus, French Guiana, 1996–2024. Emerg Infect Dis. 2026;32(5):740-744. https://doi.org/10.3201/eid3205.251435 |
|---|---|
| AMA | Lagrave A, Enfissi A, Tirera S, et al. Retrospective Phylogenetic Analysis of Mayaro Virus, French Guiana, 1996–2024. Emerging Infectious Diseases. 2026;32(5):740-744. doi:10.3201/eid3205.251435. |
| APA | Lagrave, A., Enfissi, A., Tirera, S., Epelboin, L., Duchemin, J., Succo, T....Rousset, D. (2026). Retrospective Phylogenetic Analysis of Mayaro Virus, French Guiana, 1996–2024. Emerging Infectious Diseases, 32(5), 740-744. https://doi.org/10.3201/eid3205.251435. |
Development and Validation of Real-Time PCR for Detecting Anaplasma bovis–Like Agent in Dermacentor spp. Ticks
We developed and validated a real-time PCR to detect an Anaplasma bovis–like agent. We applied that assay to 672 Dermacentor spp. ticks collected from across the United States and found 0.1% A. bovis–like agent prevalence. This assay could enhance epidemiologic surveys for this A. bovis–like agent in ticks and humans.
| EID | Smith RC, Barrantes Murillo DF, Carr A, Duncan KT, Starkey LA. Development and Validation of Real-Time PCR for Detecting Anaplasma bovis–Like Agent in Dermacentor spp. Ticks. Emerg Infect Dis. 2026;32(5):745-748. https://doi.org/10.3201/eid3205.251750 |
|---|---|
| AMA | Smith RC, Barrantes Murillo DF, Carr A, et al. Development and Validation of Real-Time PCR for Detecting Anaplasma bovis–Like Agent in Dermacentor spp. Ticks. Emerging Infectious Diseases. 2026;32(5):745-748. doi:10.3201/eid3205.251750. |
| APA | Smith, R. C., Barrantes Murillo, D. F., Carr, A., Duncan, K. T., & Starkey, L. A. (2026). Development and Validation of Real-Time PCR for Detecting Anaplasma bovis–Like Agent in Dermacentor spp. Ticks. Emerging Infectious Diseases, 32(5), 745-748. https://doi.org/10.3201/eid3205.251750. |
Exposure in Horses to Human Tick-Borne Relapsing Fever Agent Borrelia persica, Israel, 2025
Human tick-borne relapsing fever caused by Borrelia persica is common in western Asia. A survey of 301 horses in Israel revealed 9.96% seropositivity toward B. persica antigens; 1 horse (0.33%) was also PCR positive for B. persica DNA. Phylogenetic analysis supported a transmission cycle involving ticks, humans, and horses.
| EID | Shwartz D, Haras L, Nachum-Biala Y, Tirosh-Levy S, Steinman A, Baneth G. Exposure in Horses to Human Tick-Borne Relapsing Fever Agent Borrelia persica, Israel, 2025. Emerg Infect Dis. 2026;32(5):749-752. https://doi.org/10.3201/eid3205.251283 |
|---|---|
| AMA | Shwartz D, Haras L, Nachum-Biala Y, et al. Exposure in Horses to Human Tick-Borne Relapsing Fever Agent Borrelia persica, Israel, 2025. Emerging Infectious Diseases. 2026;32(5):749-752. doi:10.3201/eid3205.251283. |
| APA | Shwartz, D., Haras, L., Nachum-Biala, Y., Tirosh-Levy, S., Steinman, A., & Baneth, G. (2026). Exposure in Horses to Human Tick-Borne Relapsing Fever Agent Borrelia persica, Israel, 2025. Emerging Infectious Diseases, 32(5), 749-752. https://doi.org/10.3201/eid3205.251283. |
One Health Investigation into Fatal Encephalitis Caused by Pigeon Paramyxovirus Type 1, France
Pigeon paramyxovirus type 1 (PPMV-1) is a genotype of avian paramyxovirus type 1 that uses species of the family Columbidae as reservoir species. We report fatal PPMV-1 encephalitis in a human without immunosuppression or travel history outside metropolitan France. Postmortem analyses revealed PPMV-1 in tissues, underscoring that physicians should consider this potential diagnosis.
| EID | Veyrenche N, Boluda S, Pérot P, Malissin I, Leruez-Ville M, Jamet A, et al. One Health Investigation into Fatal Encephalitis Caused by Pigeon Paramyxovirus Type 1, France. Emerg Infect Dis. 2026;32(5):753. https://doi.org/10.3201/eid3205.251576 |
|---|---|
| AMA | Veyrenche N, Boluda S, Pérot P, et al. One Health Investigation into Fatal Encephalitis Caused by Pigeon Paramyxovirus Type 1, France. Emerging Infectious Diseases. 2026;32(5):753. doi:10.3201/eid3205.251576. |
| APA | Veyrenche, N., Boluda, S., Pérot, P., Malissin, I., Leruez-Ville, M., Jamet, A....Dheilly, N. M. (2026). One Health Investigation into Fatal Encephalitis Caused by Pigeon Paramyxovirus Type 1, France. Emerging Infectious Diseases, 32(5), 753. https://doi.org/10.3201/eid3205.251576. |
Yezo Virus Diversity in Tick Bite Patients and Ticks, Russia
Yezo virus is an emerging tickborne orthonairovirus. We detected Yezo virus RNA in tick bite patients and in Ixodes persulcatus ticks in west Siberia and Far East, Russia. Clinicians should consider the expanded area of Yezo virus identification and the I. persulcatus tick habitat when evaluating patients after tick bites in Russia.
| EID | Epik YO, Sycheva KA, Karan LS, Mokretsova EV, Dragomeretskaya AG, Trotsenko OE, et al. Yezo Virus Diversity in Tick Bite Patients and Ticks, Russia. Emerg Infect Dis. 2026;32(5):759-762. https://doi.org/10.3201/eid3205.251620 |
|---|---|
| AMA | Epik YO, Sycheva KA, Karan LS, et al. Yezo Virus Diversity in Tick Bite Patients and Ticks, Russia. Emerging Infectious Diseases. 2026;32(5):759-762. doi:10.3201/eid3205.251620. |
| APA | Epik, Y. O., Sycheva, K. A., Karan, L. S., Mokretsova, E. V., Dragomeretskaya, A. G., Trotsenko, O. E....Morozkin, E. S. (2026). Yezo Virus Diversity in Tick Bite Patients and Ticks, Russia. Emerging Infectious Diseases, 32(5), 759-762. https://doi.org/10.3201/eid3205.251620. |
Orthopoxvirus Antibodies in Feral Mammals in Mpox Outbreak Areas, Nigeria, 2021–2022
We analyzed tissue and serum samples from 124 wild animals from communities with confirmed mpox cases in Nigeria. Tissue samples were PCR-negative, but serum samples from 8 animals (6.45%)—3 feral cats, 4 giant pouched rats, and 1 shrew—revealed Orthopoxvirus antibodies, suggesting these species as probable reservoirs.
| EID | Adedeji A, Meseko C, Shittu I, Maurice N, Ladan S, Obishakin E, et al. Orthopoxvirus Antibodies in Feral Mammals in Mpox Outbreak Areas, Nigeria, 2021–2022. Emerg Infect Dis. 2026;32(5):763-767. https://doi.org/10.3201/eid3205.251565 |
|---|---|
| AMA | Adedeji A, Meseko C, Shittu I, et al. Orthopoxvirus Antibodies in Feral Mammals in Mpox Outbreak Areas, Nigeria, 2021–2022. Emerging Infectious Diseases. 2026;32(5):763-767. doi:10.3201/eid3205.251565. |
| APA | Adedeji, A., Meseko, C., Shittu, I., Maurice, N., Ladan, S., Obishakin, E....Doty, J. B. (2026). Orthopoxvirus Antibodies in Feral Mammals in Mpox Outbreak Areas, Nigeria, 2021–2022. Emerging Infectious Diseases, 32(5), 763-767. https://doi.org/10.3201/eid3205.251565. |
Severe Respiratory Illness and Death Associated with Outbreak of Human Rhinovirus B14 among Older Adults, France, 2024
We investigated an outbreak of unknown respiratory disease and 8 deaths among older adults in a long-term care facility in France. We identified human rhinovirus (HRV) by quantitative PCR and HRV-B14 by metagenomics. We obtained 5 HRV-B14 genomes that diverged from 5 publicly available genomes. Real-time metagenomics could enable rapid clinical diagnoses.
| EID | Andreani J, Boschi C, Decoppet A, Delerce J, Penant G, Karadeniz A, et al. Severe Respiratory Illness and Death Associated with Outbreak of Human Rhinovirus B14 among Older Adults, France, 2024. Emerg Infect Dis. 2026;32(5):768-773. https://doi.org/10.3201/eid3205.250981 |
|---|---|
| AMA | Andreani J, Boschi C, Decoppet A, et al. Severe Respiratory Illness and Death Associated with Outbreak of Human Rhinovirus B14 among Older Adults, France, 2024. Emerging Infectious Diseases. 2026;32(5):768-773. doi:10.3201/eid3205.250981. |
| APA | Andreani, J., Boschi, C., Decoppet, A., Delerce, J., Penant, G., Karadeniz, A....Colson, P. (2026). Severe Respiratory Illness and Death Associated with Outbreak of Human Rhinovirus B14 among Older Adults, France, 2024. Emerging Infectious Diseases, 32(5), 768-773. https://doi.org/10.3201/eid3205.250981. |
Clinical, Molecular, and Zoonotic Perspectives on Human Cases of Cryptosporidium sp. OTUi
We report a case of Cryptosporidium sp. OTUi identified in a tourist from Denmark who recently traveled to Indonesia. Previous detections include a traveler from Australia returning from Bali, a bat from the Philippines, and a patient from Australia. On the basis of those findings, we believe zoonotic transmission is plausible.
| EID | Larsen T, Baz-González E, Lebbad M, Babineau M, Koehler AV, Nielsen L, et al. Clinical, Molecular, and Zoonotic Perspectives on Human Cases of Cryptosporidium sp. OTUi. Emerg Infect Dis. 2026;32(5):774-778. https://doi.org/10.3201/eid3205.260128 |
|---|---|
| AMA | Larsen T, Baz-González E, Lebbad M, et al. Clinical, Molecular, and Zoonotic Perspectives on Human Cases of Cryptosporidium sp. OTUi. Emerging Infectious Diseases. 2026;32(5):774-778. doi:10.3201/eid3205.260128. |
| APA | Larsen, T., Baz-González, E., Lebbad, M., Babineau, M., Koehler, A. V., Nielsen, L....Stensvold, C. (2026). Clinical, Molecular, and Zoonotic Perspectives on Human Cases of Cryptosporidium sp. OTUi. Emerging Infectious Diseases, 32(5), 774-778. https://doi.org/10.3201/eid3205.260128. |
Highly Pathogenic Avian Influenza A(H5N1) Clade 2.3.4.4b Virus and Mass Mortality in Eurasian Cranes, Germany, 2025
In autumn 2025, highly pathogenic avian influenza A(H5N1) clade 2.3.4.4b virus, genotype EA-2024-DI.2.1, caused systemic infections leading to a mass mortality event among the western migrating subpopulation of Eurasian cranes (Grus grus) in Germany. Gregarious behavior at feeding and resting sites likely promoted rapid viral spread within the population.
| EID | Günther A, Herrmann C, Sehl-Ewert J, Piro S, Ahrens A, Calvelage S, et al. Highly Pathogenic Avian Influenza A(H5N1) Clade 2.3.4.4b Virus and Mass Mortality in Eurasian Cranes, Germany, 2025. Emerg Infect Dis. 2026;32(5):779-783. https://doi.org/10.3201/eid3205.260170 |
|---|---|
| AMA | Günther A, Herrmann C, Sehl-Ewert J, et al. Highly Pathogenic Avian Influenza A(H5N1) Clade 2.3.4.4b Virus and Mass Mortality in Eurasian Cranes, Germany, 2025. Emerging Infectious Diseases. 2026;32(5):779-783. doi:10.3201/eid3205.260170. |
| APA | Günther, A., Herrmann, C., Sehl-Ewert, J., Piro, S., Ahrens, A., Calvelage, S....Harder, T. (2026). Highly Pathogenic Avian Influenza A(H5N1) Clade 2.3.4.4b Virus and Mass Mortality in Eurasian Cranes, Germany, 2025. Emerging Infectious Diseases, 32(5), 779-783. https://doi.org/10.3201/eid3205.260170. |
Genomic Analysis of Sin Nombre Virus Sequences, Northwestern United States, 2023
We report Sin Nombre virus (SNV) genome sequences in the northwestern United States, including SNV sequences recovered from montane voles. Analysis of samples collected from 189 individual rodents revealed high SNV prevalence in the region and evidence of virus reassortment or coinfection, highlighting ongoing virus diversification in rodents.
| EID | Rickard G, Rivero R, Grady A, Horton J, Lauritsen CJ, Fawcett S, et al. Genomic Analysis of Sin Nombre Virus Sequences, Northwestern United States, 2023. Emerg Infect Dis. 2026;32(5):784-789. https://doi.org/10.3201/eid3205.251476 |
|---|---|
| AMA | Rickard G, Rivero R, Grady A, et al. Genomic Analysis of Sin Nombre Virus Sequences, Northwestern United States, 2023. Emerging Infectious Diseases. 2026;32(5):784-789. doi:10.3201/eid3205.251476. |
| APA | Rickard, G., Rivero, R., Grady, A., Horton, J., Lauritsen, C. J., Fawcett, S....Seifert, S. N. (2026). Genomic Analysis of Sin Nombre Virus Sequences, Northwestern United States, 2023. Emerging Infectious Diseases, 32(5), 784-789. https://doi.org/10.3201/eid3205.251476. |
Serologic Surveillance of Highly Pathogenic Avian Influenza Virus Subtype H5 in Wildlife, Northeast Germany, 2023–2025
We tested wild ruminants, boar, and carnivores in northeast Germany for highly pathogenic avian influenza subtype H5 antibodies. Wild ruminants were seronegative, but 3.5% of boar and 12.5%–21.9% of carnivores were seropositive, indicating frequent spillover. Because such events might accelerate mammalian (and ultimately human) adaptation, sustained monitoring remains essential.
| EID | Günther A, Wassermann J, Heck J, Bussi M, Aebischer A, Staubach C, et al. Serologic Surveillance of Highly Pathogenic Avian Influenza Virus Subtype H5 in Wildlife, Northeast Germany, 2023–2025. Emerg Infect Dis. 2026;32(5):790-793. https://doi.org/10.3201/eid3205.251555 |
|---|---|
| AMA | Günther A, Wassermann J, Heck J, et al. Serologic Surveillance of Highly Pathogenic Avian Influenza Virus Subtype H5 in Wildlife, Northeast Germany, 2023–2025. Emerging Infectious Diseases. 2026;32(5):790-793. doi:10.3201/eid3205.251555. |
| APA | Günther, A., Wassermann, J., Heck, J., Bussi, M., Aebischer, A., Staubach, C....Wernike, K. (2026). Serologic Surveillance of Highly Pathogenic Avian Influenza Virus Subtype H5 in Wildlife, Northeast Germany, 2023–2025. Emerging Infectious Diseases, 32(5), 790-793. https://doi.org/10.3201/eid3205.251555. |
Replication Efficiency of Contemporary Highly Pathogenic Avian Influenza A(H5N1) Virus Isolates in Human Nasal Epithelium Model
Replication of influenza A virus in human nasal epithelium affects transmissibility and disease. We compared virus replication and immune responses in human nasal epithelium infected with seasonal and highly pathogenic avian influenza A(H5N1) viruses. Contemporary H5N1 viruses replicated better than the historical isolate; however, interferon response to B3.13 genotype viruses was dampened.
| EID | Flagg M, Winski CJ, Brackney BG, Lutterman TR, Ortiz-Morales JA, Williamson BN, et al. Replication Efficiency of Contemporary Highly Pathogenic Avian Influenza A(H5N1) Virus Isolates in Human Nasal Epithelium Model. Emerg Infect Dis. 2026;32(5):794-799. https://doi.org/10.3201/eid3205.260053 |
|---|---|
| AMA | Flagg M, Winski CJ, Brackney BG, et al. Replication Efficiency of Contemporary Highly Pathogenic Avian Influenza A(H5N1) Virus Isolates in Human Nasal Epithelium Model. Emerging Infectious Diseases. 2026;32(5):794-799. doi:10.3201/eid3205.260053. |
| APA | Flagg, M., Winski, C. J., Brackney, B. G., Lutterman, T. R., Ortiz-Morales, J. A., Williamson, B. N....de Wit, E. (2026). Replication Efficiency of Contemporary Highly Pathogenic Avian Influenza A(H5N1) Virus Isolates in Human Nasal Epithelium Model. Emerging Infectious Diseases, 32(5), 794-799. https://doi.org/10.3201/eid3205.260053. |
Tropism and Replication Competence of Cattle Influenza A(H5N1) Genotype B3.13 Virus in Human Bronchus and Lung Tissue
In 2024, influenza A(H5N1) genotype B3.13 viruses emerged from cattle and caused mild spillover infections in humans. Using human bronchus and lung tissue, we evaluated tropism, replication, and pathogenesis of 2 cattle influenza isolates. Those viruses showed moderate replication competence and induced robust proinflammatory responses, suggesting potential risk for human health.
| EID | Hui K, Ho J, Ng K, Webby RJ, Peiris M, Nicholls JM, et al. Tropism and Replication Competence of Cattle Influenza A(H5N1) Genotype B3.13 Virus in Human Bronchus and Lung Tissue. Emerg Infect Dis. 2026;32(5):800-804. https://doi.org/10.3201/eid3205.251926 |
|---|---|
| AMA | Hui K, Ho J, Ng K, et al. Tropism and Replication Competence of Cattle Influenza A(H5N1) Genotype B3.13 Virus in Human Bronchus and Lung Tissue. Emerging Infectious Diseases. 2026;32(5):800-804. doi:10.3201/eid3205.251926. |
| APA | Hui, K., Ho, J., Ng, K., Webby, R. J., Peiris, M., Nicholls, J. M....Chan, M. (2026). Tropism and Replication Competence of Cattle Influenza A(H5N1) Genotype B3.13 Virus in Human Bronchus and Lung Tissue. Emerging Infectious Diseases, 32(5), 800-804. https://doi.org/10.3201/eid3205.251926. |
Photo Quizzes
Photo Quiz
| EID | Raele D, Cavaliere N. Photo Quiz. Emerg Infect Dis. 2026;32(5):805-808. https://doi.org/10.3201/eid3205.260029 |
|---|---|
| AMA | Raele D, Cavaliere N. Photo Quiz. Emerging Infectious Diseases. 2026;32(5):805-808. doi:10.3201/eid3205.260029. |
| APA | Raele, D., & Cavaliere, N. (2026). Photo Quiz. Emerging Infectious Diseases, 32(5), 805-808. https://doi.org/10.3201/eid3205.260029. |
Research Letters
Serial Interval and Intervention Efficiency in Pertussis Outbreak, South Korea, 2024
We estimated an unmitigated mean serial interval during a school-based pertussis outbreak in South Korea at 14.7 (95% credible interval 9.0–27.4) days, comparable with previous estimates. Public health interventions reduced the effective reproduction number by 65% (95% credible interval 26%–88%), which likely brought it to <1 and contributed to curbing the outbreak.
| EID | Akhmetzhanov AR, de Padua B, Dushoff J. Serial Interval and Intervention Efficiency in Pertussis Outbreak, South Korea, 2024. Emerg Infect Dis. 2026;32(5):809-811. https://doi.org/10.3201/eid3205.251304 |
|---|---|
| AMA | Akhmetzhanov AR, de Padua B, Dushoff J. Serial Interval and Intervention Efficiency in Pertussis Outbreak, South Korea, 2024. Emerging Infectious Diseases. 2026;32(5):809-811. doi:10.3201/eid3205.251304. |
| APA | Akhmetzhanov, A. R., de Padua, B., & Dushoff, J. (2026). Serial Interval and Intervention Efficiency in Pertussis Outbreak, South Korea, 2024. Emerging Infectious Diseases, 32(5), 809-811. https://doi.org/10.3201/eid3205.251304. |
Herpes Simplex Virus 1 in Trigeminal Ganglia of Trafficked Neotropical Primates, Peru, 2024
We detected herpes simplex virus 1 in the trigeminal ganglia of trafficked Neotropical primates (1 Aotus azarai; 3 Sapajus macrocephalus) in Peru. Tests also revealed Saimiriine alphaherpesvirus 1 in the trigeminal ganglia of 2 Saimiri sp. monkeys. Our findings suggest latency and raise concerns about diagnostic standards, viral reactivation, and spillover risks.
| EID | Vilchez-Delgado F, Zhou L, O’Connor S, Colan R, Escobar-Mendoza L, Mendoza A, et al. Herpes Simplex Virus 1 in Trigeminal Ganglia of Trafficked Neotropical Primates, Peru, 2024. Emerg Infect Dis. 2026;32(5):811-814. https://doi.org/10.3201/eid3205.251408 |
|---|---|
| AMA | Vilchez-Delgado F, Zhou L, O’Connor S, et al. Herpes Simplex Virus 1 in Trigeminal Ganglia of Trafficked Neotropical Primates, Peru, 2024. Emerging Infectious Diseases. 2026;32(5):811-814. doi:10.3201/eid3205.251408. |
| APA | Vilchez-Delgado, F., Zhou, L., O’Connor, S., Colan, R., Escobar-Mendoza, L., Mendoza, A....Rosenbaum, M. H. (2026). Herpes Simplex Virus 1 in Trigeminal Ganglia of Trafficked Neotropical Primates, Peru, 2024. Emerging Infectious Diseases, 32(5), 811-814. https://doi.org/10.3201/eid3205.251408. |
Probable Bartonella clarridgeiae Prosthetic Valve Endocarditis and Aortic Root Abscess, Australia, 2020
We describe a case of endocarditis and aortic root abscess caused by Bartonella clarridgeiae bacteria in a patient in Australia. The patient initially sought care for leg pain and was found to have bilateral tibioperoneal trunk mycotic aneurysms. 16S rRNA PCR on excised aneurysm tissue identified the cause as B. clarridgeiae.
| EID | Cribb M, Coghill S. Probable Bartonella clarridgeiae Prosthetic Valve Endocarditis and Aortic Root Abscess, Australia, 2020. Emerg Infect Dis. 2026;32(5):814-816. https://doi.org/10.3201/eid3205.251558 |
|---|---|
| AMA | Cribb M, Coghill S. Probable Bartonella clarridgeiae Prosthetic Valve Endocarditis and Aortic Root Abscess, Australia, 2020. Emerging Infectious Diseases. 2026;32(5):814-816. doi:10.3201/eid3205.251558. |
| APA | Cribb, M., & Coghill, S. (2026). Probable Bartonella clarridgeiae Prosthetic Valve Endocarditis and Aortic Root Abscess, Australia, 2020. Emerging Infectious Diseases, 32(5), 814-816. https://doi.org/10.3201/eid3205.251558. |
Borrelia turicatae in Ticks from Animals in a Public Park, Aguascalientes, Mexico
We obtained 5 isolates of Borrelia turicatae from ticks captured in a public park in Aguascalientes, Mexico. A serologic survey in resident fauna showed antibodies against B. turicatae. Relapsing fever borrelias are present in Ornithodoros turicata ticks and circulate in a zoonotic cycle, posing a risk for human infection.
| EID | Vázquez-Guerrero E, Paniagua-Campos G, Kneubehl AR, de los Santos P, Lopez JE, Ibarra J. Borrelia turicatae in Ticks from Animals in a Public Park, Aguascalientes, Mexico. Emerg Infect Dis. 2026;32(5):816-819. https://doi.org/10.3201/eid3205.251925 |
|---|---|
| AMA | Vázquez-Guerrero E, Paniagua-Campos G, Kneubehl AR, et al. Borrelia turicatae in Ticks from Animals in a Public Park, Aguascalientes, Mexico. Emerging Infectious Diseases. 2026;32(5):816-819. doi:10.3201/eid3205.251925. |
| APA | Vázquez-Guerrero, E., Paniagua-Campos, G., Kneubehl, A. R., de los Santos, P., Lopez, J. E., & Ibarra, J. (2026). Borrelia turicatae in Ticks from Animals in a Public Park, Aguascalientes, Mexico. Emerging Infectious Diseases, 32(5), 816-819. https://doi.org/10.3201/eid3205.251925. |
Genomic Surveillance of Lassa Virus through In-Country Sequencing, Guinea
Strengthened in-country sequencing generated 28 Lassa virus genomes from human clinical cases in Guinea, expanding knowledge of Lassa fever in the country. Phylogeographic analysis revealed cross-border exchange between Liberia and the N’Zérékoré region and a Sierra Leone introduction into Guéckédou. Enhanced genomic surveillance is crucial to guide public health.
| EID | Camara J, Annibaldis G, Klaps J, Ifono K, Koundouno F, Sidibé Y, et al. Genomic Surveillance of Lassa Virus through In-Country Sequencing, Guinea. Emerg Infect Dis. 2026;32(5):819-824. https://doi.org/10.3201/eid3205.260386 |
|---|---|
| AMA | Camara J, Annibaldis G, Klaps J, et al. Genomic Surveillance of Lassa Virus through In-Country Sequencing, Guinea. Emerging Infectious Diseases. 2026;32(5):819-824. doi:10.3201/eid3205.260386. |
| APA | Camara, J., Annibaldis, G., Klaps, J., Ifono, K., Koundouno, F., Sidibé, Y....Boumbaly, S. (2026). Genomic Surveillance of Lassa Virus through In-Country Sequencing, Guinea. Emerging Infectious Diseases, 32(5), 819-824. https://doi.org/10.3201/eid3205.260386. |
Highly Pathogenic Avian Influenza A(H5N1) Virus RNA in Bovine Semen, California, USA, 2024
Since March 2024, highly pathogenic avian influenza (HPAI) A(H5N1) virus has infected dairy cattle in the United States, prompting concern about novel transmission routes. During an outbreak in California, HPAI H5N1 RNA was detected in an asymptomatic bull’s semen. Although infectious virus was not isolated, semen-associated transmission risks and biosecurity practices remain a concern.
| EID | Lim A, Poulsen K, Caserta LC, Guan L, Opgenorth E, Beal MP, et al. Highly Pathogenic Avian Influenza A(H5N1) Virus RNA in Bovine Semen, California, USA, 2024. Emerg Infect Dis. 2026;32(5):824-826. https://doi.org/10.3201/eid3205.251639 |
|---|---|
| AMA | Lim A, Poulsen K, Caserta LC, et al. Highly Pathogenic Avian Influenza A(H5N1) Virus RNA in Bovine Semen, California, USA, 2024. Emerging Infectious Diseases. 2026;32(5):824-826. doi:10.3201/eid3205.251639. |
| APA | Lim, A., Poulsen, K., Caserta, L. C., Guan, L., Opgenorth, E., Beal, M. P....Diel, D. G. (2026). Highly Pathogenic Avian Influenza A(H5N1) Virus RNA in Bovine Semen, California, USA, 2024. Emerging Infectious Diseases, 32(5), 824-826. https://doi.org/10.3201/eid3205.251639. |
Human Respiratory Syncytial Virus in Vaccinated and Unvaccinated Adults, Georgia, USA, 2024–2025
We analyzed respiratory syncytial virus genome sequences from adults in Georgia, USA, during 2024–2025. We found multiple co-circulating lineages of both A and B subtypes. We identified few mutations in F protein antigenic sites in this population with low vaccine uptake, highlighting the need for ongoing genomic surveillance.
| EID | Rachida S, Ahmed A, Rojas-Gallardo D, Tafesse H, Dakanay H, Duford M, et al. Human Respiratory Syncytial Virus in Vaccinated and Unvaccinated Adults, Georgia, USA, 2024–2025. Emerg Infect Dis. 2026;32(5):827-829. https://doi.org/10.3201/eid3205.251997 |
|---|---|
| AMA | Rachida S, Ahmed A, Rojas-Gallardo D, et al. Human Respiratory Syncytial Virus in Vaccinated and Unvaccinated Adults, Georgia, USA, 2024–2025. Emerging Infectious Diseases. 2026;32(5):827-829. doi:10.3201/eid3205.251997. |
| APA | Rachida, S., Ahmed, A., Rojas-Gallardo, D., Tafesse, H., Dakanay, H., Duford, M....Piantadosi, A. (2026). Human Respiratory Syncytial Virus in Vaccinated and Unvaccinated Adults, Georgia, USA, 2024–2025. Emerging Infectious Diseases, 32(5), 827-829. https://doi.org/10.3201/eid3205.251997. |
Letters
Evidence of Rat Hepatitis E Virus Circulation through Wastewater Surveillance, Central Argentina
| EID | Abravanel F, Castille C, Marter N, Guerin J, Lhomme S, Izopet J. Evidence of Rat Hepatitis E Virus Circulation through Wastewater Surveillance, Central Argentina. Emerg Infect Dis. 2026;32(5):830. https://doi.org/10.3201/eid3205.260304 |
|---|---|
| AMA | Abravanel F, Castille C, Marter N, et al. Evidence of Rat Hepatitis E Virus Circulation through Wastewater Surveillance, Central Argentina. Emerging Infectious Diseases. 2026;32(5):830. doi:10.3201/eid3205.260304. |
| APA | Abravanel, F., Castille, C., Marter, N., Guerin, J., Lhomme, S., & Izopet, J. (2026). Evidence of Rat Hepatitis E Virus Circulation through Wastewater Surveillance, Central Argentina. Emerging Infectious Diseases, 32(5), 830. https://doi.org/10.3201/eid3205.260304. |
Evidence Lacking for Endemic Chagas Disease in the United States
| EID | Cantey PT, Hast M, Chancey RJ, Mongomery SP. Evidence Lacking for Endemic Chagas Disease in the United States. Emerg Infect Dis. 2026;32(5):830-831. https://doi.org/10.3201/eid3205.251840 |
|---|---|
| AMA | Cantey PT, Hast M, Chancey RJ, et al. Evidence Lacking for Endemic Chagas Disease in the United States. Emerging Infectious Diseases. 2026;32(5):830-831. doi:10.3201/eid3205.251840. |
| APA | Cantey, P. T., Hast, M., Chancey, R. J., & Mongomery, S. P. (2026). Evidence Lacking for Endemic Chagas Disease in the United States. Emerging Infectious Diseases, 32(5), 830-831. https://doi.org/10.3201/eid3205.251840. |
Evidence Lacking for Endemic Chagas Disease in the United States (Response)
| EID | Beatty NL, Hamer GL, Moreno-Peniche B, Mayes B, Hamer SA. Evidence Lacking for Endemic Chagas Disease in the United States (Response). Emerg Infect Dis. 2026;32(5):831. https://doi.org/10.3201/eid3205.260617 |
|---|---|
| AMA | Beatty NL, Hamer GL, Moreno-Peniche B, et al. Evidence Lacking for Endemic Chagas Disease in the United States (Response). Emerging Infectious Diseases. 2026;32(5):831. doi:10.3201/eid3205.260617. |
| APA | Beatty, N. L., Hamer, G. L., Moreno-Peniche, B., Mayes, B., & Hamer, S. A. (2026). Evidence Lacking for Endemic Chagas Disease in the United States (Response). Emerging Infectious Diseases, 32(5), 831. https://doi.org/10.3201/eid3205.260617. |
Books and Media
The Big One: How We Must Prepare for Future Deadly Pandemics
| EID | Dillingham CN, Brooks GA, Brooks YM. The Big One: How We Must Prepare for Future Deadly Pandemics. Emerg Infect Dis. 2026;32(5):832. https://doi.org/10.3201/eid3205.252036 |
|---|---|
| AMA | Dillingham CN, Brooks GA, Brooks YM. The Big One: How We Must Prepare for Future Deadly Pandemics. Emerging Infectious Diseases. 2026;32(5):832. doi:10.3201/eid3205.252036. |
| APA | Dillingham, C. N., Brooks, G. A., & Brooks, Y. M. (2026). The Big One: How We Must Prepare for Future Deadly Pandemics. Emerging Infectious Diseases, 32(5), 832. https://doi.org/10.3201/eid3205.252036. |
Etymologia
Borealpox [bōr′-ē-әl-poks]
| EID | Miranda JL. Borealpox [bōr′-ē-әl-poks]. Emerg Infect Dis. 2026;32(5):767. https://doi.org/10.3201/eid3205.241377 |
|---|---|
| AMA | Miranda JL. Borealpox [bōr′-ē-әl-poks]. Emerging Infectious Diseases. 2026;32(5):767. doi:10.3201/eid3205.241377. |
| APA | Miranda, J. L. (2026). Borealpox [bōr′-ē-әl-poks]. Emerging Infectious Diseases, 32(5), 767. https://doi.org/10.3201/eid3205.241377. |
About the Cover
Gone to the Dogs—The Canon of Kitsch
| EID | Mitchell L. Gone to the Dogs—The Canon of Kitsch. Emerg Infect Dis. 2026;32(5):833-835. https://doi.org/10.3201/eid3205.ac3205 |
|---|---|
| AMA | Mitchell L. Gone to the Dogs—The Canon of Kitsch. Emerging Infectious Diseases. 2026;32(5):833-835. doi:10.3201/eid3205.ac3205. |
| APA | Mitchell, L. (2026). Gone to the Dogs—The Canon of Kitsch. Emerging Infectious Diseases, 32(5), 833-835. https://doi.org/10.3201/eid3205.ac3205. |







