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Volume 13, Number 1—January 2007

Research

Panmicrobial Oligonucleotide Array for Diagnosis of Infectious Diseases

Gustavo Palacios*1, Phenix-Lan Quan*1, Omar J. Jabado*, Sean Conlan*, David L. Hirschberg†, Yang Liu‡, Junhui Zhai*, Neil Renwick*, Jeffrey Hui*, Hedi Hegyi*§, Allen Grolla¶, James E. Strong¶, Jonathan S. Towner#, Thomas W. Geisbert**, Peter B. Jahrling††, Cornelia Büchen-Osmond*, Heinz Ellerbrok‡‡, Maria Paz Sanchez-Seco§§, Yves Lussier‡, Pierre Formenty¶¶, Stuart T. Nichol#, Heinz Feldmann¶##, Thomas Briese*, and W. Ian Lipkin*Comments to Author 

Author affiliations: *Columbia University, New York, New York, USA; †Stanford University, Stanford, California, USA; ‡University of Chicago, Chicago, Illinois, USA; §Institute of Enzymology, Budapest, Hungary; ¶Public Health Agency of Canada, Winnipeg, Manitoba, Canada; #Centers for Disease Control and Prevention, Atlanta, Georgia, USA; **US Army Medical Research Institute of Infectious Diseases, Fort Detrick, Frederick, Maryland, USA; ††National Institutes of Health Integrated Research Facility, Fort Detrick, Frederick, Maryland, USA; ‡‡Robert Koch Institut, Berlin, Germany; §§Instituto de Salud Carlos III, Madrid, Spain; ¶¶World Health Organization, Geneva, Switzerland; ##University of Manitoba, Winnipeg, Manitoba, Canada;

Main Article

Table 2

RNA virus isolates from tissue culture samples used to test GreeneChip performance

VirusGenus
Negative-strand virus
  Lake Victoria marburgvirus†Marburgvirus
  Zaire ebolavirus‡Ebolavirus
  Sudan ebolavirus‡Ebolavirus
  Reston ebolavirus‡Ebolavirus
  Human respiratory syncytial virus A§Pneumovirus
  Human respiratory syncytial virus B§Pneumovirus
  Human parainfluenza virus 1§Respirovirus
  Human parainfluenza virus 3§Respirovirus
  Newcastle disease virus¶Avulavirus
  Vesicular stomatitis Indiana virus¶Vesiculovirus
  Bovine ephemeral fever virus¶Ephemerovirus
  Influenza A virus (H5N1)#Orthomyxovirus
  Influenza B virus§Orthomyxovirus
  Guanarito virus‡Arenavirus
  Machupo virus‡Arenavirus
  Junin virus‡Arenavirus
  Lassa virus strain Josiah‡Arenavirus
  Lassa virus strain Weller‡
Arenavirus
Positive-strand virus
  Human enterovirus B (E25)§Enterovirus
  Human enterovirus A (HEV71)§Enterovirus
  Human enterovirus B (E14)§Enterovirus
  Human enterovirus B (E30)§Enterovirus
  Vesicular exanthema of swine virus¶Vesivirus
  SARS* coronavirus**Coronavirus
  Human coronavirus OC43§Coronavirus
  Human coronavirus 229E§Coronavirus
  Dengue virus 1#Flavivirus
  Dengue virus 2#Flavivirus
  Dengue virus 3#Flavivirus
  Dengue virus 4#Flavivirus
  Yellow fever virus#Flavivirus
  West Nile virus**Flavivirus
  Saint Louis encephalitis virus**Flavivirus
  Alfuy virus††Flavivirus
  Murray Valley encephalitis virus††Flavivirus
  Chikungunya virus#Alphavirus
  Sindbis virus¶
Alphavirus
Double-strand virus
  Bluetongue virus¶Orbivirus
  Epizootic hemorrhagic disease virus-2¶Orbivirus

*SARS, severe acute respiratory syndrome.
†Centers for Disease Control and Prevention, Atlanta, GA, USA.
‡US Army Medical Research Institute of Infectious Diseases, Fort Detrick, Frederick, MD, USA.
§American Type Culture Collection, Manassas, VA, USA.
¶Commonwealth Scientific and Industrial Research Organization, Melbourne, Victoria, Australia.
#Centro Nacional de Microbiologica, Madrid, Spain.
**Columbia University, New York, NY, USA.
††Curtin Institute of Technology, Perth, Western Australia, Australia.

Main Article

1These authors contributed equally to this study.

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