Volume 18, Number 12—December 2012
Dispatch
Porcine Reproductive and Respiratory Syndrome Virus, Thailand, 2010–2011
Dachrit Nilubol
, Thitima Tripipat, Tawatchai Hoonsuwan, and Khampee Kortheerakul
, Thitima Tripipat, Tawatchai Hoonsuwan, and Khampee KortheerakulTable 2
PRRSV isolates obtained for sequence analysis from infected pig herds, Thailand, 2010–2011*
| Isolate no. | Isolate name | Year and month collected | Genotype | Genes analyzed | GenBank accession no. |
|---|---|---|---|---|---|
| 1 | UD1210EU24/3 | 2010 Dec | I | ORF5 | JX183110 |
| 2 | UD1210EU23/2 | 2010 Dec | I | ORF5 | JX183111 |
| 3 | UD1210EU24/1 | 2010 Dec | I | ORF5 | JX183112 |
| 4 | SCP1210EU7/79-A07 | 2010 Dec | I | ORF5 | JX183113 |
| 5 | UD1210EU24/2 | 2010 Dec | I | ORF5 | JX183114 |
| 6 | UD1210EU24/1 | 2010 Dec | I | ORF5 | JX183115 |
| 7 | UD1210EU25/2 | 2010 Dec | I | ORF5 | JX183116 |
| 8 | UD1210EU25/1 | 2010 Dec | I | ORF5 | JX183117 |
| 9 | SCP0311EU1/3 | 2011 Mar | I | ORF5 | JX183118 |
| 10 | SCP0311EU1/2 | 2011 Mar | I | ORF5 | JX183119 |
| 11 | FDT0111EU2/3 | 2011 Mar | I | ORF5 | JX183120 |
| 12 | FDT0111EU2/2 | 2011 Mar | I | ORF5 | JX183121 |
| 13 | UD1210EU23/3 | 2010 Dec | I | ORF5 | JX183122 |
| 14 | SCP0311EU1/1 | 2011 Mar | I | ORF5 | JX183123 |
| 15 | FDT0111EU1/2 | 2011 Mar | I | ORF5 | JX183124 |
| 16 | SCP0311EU3/1 | 2011 Mar | I | ORF5 | JX183125 |
| 17 | FDT0111EU1/1 | 2011 Mar | I | ORF5 | JX183126 |
| 18 | FDT0111EU2/1 | 2011 Mar | I | ORF5 | JX183127 |
| 19 | SCP0311EU3/2 | 2011 Mar | I | ORF5 | JX183128 |
| 20 | UDT0810US_5/28–160 | 2010 Dec | II | ORF5 | JN255819 |
| 21 | UDT0810US_5/28–161 | 2010 Dec | II | ORF5 | JN255820 |
| 22 | UDT0810US_5/28–162 | 2010 Dec | II | ORF5 | JN255821 |
| 23 | UDT0810US_5/28–163 | 2010 Dec | II | ORF5 | JN255822 |
| 24 | UDT0810US_5/28–164 | 2010 Dec | II | ORF5 | JN255823 |
| 25 | UDT0810US_5/28–165 | 2010 Dec | II | ORF5 | JN255824 |
| 26 | UDT0810US_5/28–166 | 2010 Dec | II | ORF5 | JN255825 |
| 27 | UDT0810US_5/28–167 | 2010 Dec | II | ORF5 | JN255826 |
| 28 | UD1210US/61-E03 | 2010 Dec | II | ORF5 | JN255827 |
| 29 | UD1210US/61-F03 | 2010 Dec | II | ORF5 | JN255828 |
| 30 | UD1210US/61-G03 | 2010 Dec | II | ORF5 | JN255829 |
| 31 | UD1210US/62-H03 | 2010 Dec | II | ORF5 | JN255830 |
| 32 | UD1210US/62-A04 | 2010 Dec | II | ORF5 | JN255831 |
| 33 | UD1210US/62-B04 | 2010 Dec | II | ORF5 | JN255832 |
| 34 | UD1210US-25–1 | 2010 Dec | II | ORF5 | JN255833 |
| 35 | FDT10US-2–1 | 2010 Dec | II | ORF5 | JN255834 |
| 36 | FDT10US-2–2 | 2010 Dec | II | ORF5 | JN255835 |
| 37 | FDT10US-2–3 | 2010 Dec | II | ORF5 | JN255836 |
| 38 | SCP1210-U.S.-7–79–1 | 2010 Dec | II | ORF5 | JN255837 |
| 39 | SCP1210-U.S.-7–79–2 | 2010 Dec | II | ORF5 | JN255838 |
| 40 | UDT0810_E02 | 2010 Dec | II | Partial Nsp2 | JN255839 |
| 41 | UDT0810_C02 | 2010 Dec | II | Partial Nsp2 | JN255840 |
| 42 | SCP1210_H02 | 2010 Dec | II | Partial Nsp2 | JN255842 |
| 43 | SCP1210_B03 | 2010 Dec | II | Partial Nsp2 | JN255841 |
| 44 | FST0311_C03 | 2010 Dec | II | Partial Nsp2 | JN255843 |
| 45 | UD1210 (31)14–1 | 2010 Dec | II | Partial Nsp2 | JN255844 |
| 46 | UD1210 (31)14–2 | 2010 Dec | II | Partial Nsp2 | JN255845 |
| 47 | 1–13(30)UD-1 | 2010 Dec | II | Partial Nsp2 | JN255846 |
| 48 | UD1210 (31)13–2 | 2010 Dec | II | Partial Nsp2 | JN255847 |
| 49 | FDT10_3/2 | 2010 Dec | II | Partial Nsp2 | JN255848 |
| 50 | FDT_3/1 | 2010 Dec | II | Partial Nsp2 | JN255849 |
| 51 | FDT_2/1 | 2010 Dec | II | Partial Nsp2 | JN255852 |
| 52 | FDT_2/2 | 2010 Dec | II | Partial Nsp2 | JN255851 |
| 53 | FDT_2/3 | 2010 Dec | II | Partial Nsp2 | JN255850 |
| 54 | FST0311_54–4.1 | 2010 Dec | II | Partial Nsp2 | JN255853 |
| 55 | FST0611_G03 | 2010 Dec | II | Partial Nsp2 | JN255854 |
| 56 | FST0611_F03 | 2010 Dec | II | Partial Nsp2 | JN255855 |
| 57 | FST0611_E03 | 2010 Dec | II | Partial Nsp2 | JN255856 |
| 58 |
US65DPI-2 |
2010 Dec |
II |
Partial Nsp2 |
JN255857 |
| *PRRSV, porcine reproductive and respiratory syndrome virus; ORF, open reading frame; Nsp2, nonstructural protein 2. | |||||
