Deletion Variants of Middle East Respiratory Syndrome Coronavirus from Humans, Jordan, 2015
Mart M. Lamers
1, V. Stalin Raj
1, Mah’d Shafei
1, Sami Sheikh Ali, Sultan M. Abdallh, Mahmoud Gazo, Samer Nofal, Xiaoyan Lu, Dean D. Erdman, Marion Koopmans, Mohammad Abdallat, Bart L. Haagmans
, and Bart L. Haagmans
Author affiliations: Erasmus University Medical Center, Rotterdam, the Netherlands (M.M. Lamers, V.S. Raj, M.P. Koopmans, B.L. Haagmans); Jordan Ministry of Health, Amman, Jordan (M. Shafei, S.S. Ali, S.M. Abdallh, M. Gazo, S. Nofal, M. Abdallat, A. Haddadin); Centers for Disease Control and Prevention, Atlanta, Georgia, USA (X. Lu, D.D. Erdman)
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Figure 1
Figure 1. Phylogenetic analysis of Middle East respiratory syndrome coronavirus (MERS-CoV) isolated from Jordan (Jordan-1-2015; boldface) compared with reference strains. Genome sequences of representative isolates were aligned by using ClustalW, and a phylogenetic tree was constructed by using the PhyML method in Seaview 4 (http://pbil.univ-lyon1.fr/software/seaview); the tree was visualized by using FigTree version 1.3.1 (http://tree.bio.ed.ac.uk/software/figtree). Values at branches show the result of the approximate likelihood ratio; values <0.70 are not shown. Scale bar indicates nucleotide substitutions per site.
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