Volume 11, Number 1—January 2005
Dispatch
G, N, and P Gene-based Analysis of Chandipura Viruses, India
Vidya A. Arankalle*
, Shrotri Sandhya Prabhakar*, Walimbe Atul Madhukar*, Pawar Shailesh Dattatraya*, Mishra Akhilesh Chandra*, and Hanumaih
, Shrotri Sandhya Prabhakar*, Walimbe Atul Madhukar*, Pawar Shailesh Dattatraya*, Mishra Akhilesh Chandra*, and HanumaihTable 2
Primers used for amplification and sequencing
| Gene | Primers |
|---|---|
| G gene | |
| CHAND-G-F1 | 27-5′ ATGACTTCTTCAGTGACAATTAGT 3′-50 |
| CHAND-G-F2 | 425-5′ GTCTTGTGGTTATGCTTCTGT 3′-445 |
| CHAND-G-F3 | 853-5′ TGTGTCCGACCGGGATCAGAGGT 3′-875 |
| CHAND-G-F4 | 1278-5′ GACAATGAACTACACGAGCT 3′-1297 |
| CHAND-G-R1 | 1741-5′ TCATCCACCGGGTTGAGATCCAT 3′-1708 |
| CHAND-G-R2 | 1342-5′ TGAGCATGAGGTAGCTGTGGAT 3′-1321 |
| CHAND-G-R3 | 30-5′ TCCTCTGAATCTCTGAGGTC 3′-911 |
| CHAND-G-R4 | 471-5′ TGATTACCAAGAACTCAGAGT 3′-451 |
| N / P gene | |
| CHAND-N-F1 | 31-5′ TATAGTAGTACACGAACACT 3′-50 |
| CHAND-N-F2 | 481-5′ TCTTTGGTCTTTATCGTG TGT 3′-501 |
| CHAND-N F3 | 871-5′ TTGACCAAGCTGATTCCTACAT 3′-892 |
| CHAND-N-F4 | 1279-5′ TAGGAGATATTCGAGTGAACT 3′-1299 |
| CHAND-N-F5 | 1742-5′ TGAGTGCTCTCCAACTTCTGCAGT 3′-1765 |
| CHAND-N-F6 | 2281-5′ CAGATTCTCTGTTGCTTACCACT 3′-2306 |
| CHAND-N-R1 | 531-5′ TCTTCTTGTACTCGACCTGT 3′-512 |
| CHAND-N-R2 | 942-5′ TTGAAGAGTAAGGAGACTTCGT 3′-921 |
| CHAND-N-R3 | 1320-5′ TCCTGGCGTACTCTGCAACT 3′-1301 |
| CHAND-N-R4 | 1830-5′ TGTGCTGATCTGCAACAGCCT 3′-1810 |
| CHAND-N-R5 | 2331-5′ TTCTTCAGAGCTTGCATCTTGAT 3′-2309 |
| CHAND-3′-F | 11-5′ TATGTCTTATAAGAATGCTATT 3′-32 |
