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Volume 17, Number 11—November 2011


Close Similarity between Sequences of Hepatitis E Virus Recovered from Humans and Swine, France, 2008−2009

Jérôme Bouquet, Sophie Tessé, Aurélie Lunazzi, Marc Eloit, Nicolas Rose, Elisabeth Nicand, and Nicole PavioComments to Author 
Author affiliations: Anses, Laboratoire de Santé Animale, Maisons-Alfort, France (J. Bouquet, A. Lunazzi, N. Pavio); Hôpital des Armées Val de Grâce, Paris, France (S. Tessé, E. Nicand); Ecole Nationale Vétérinaire d’Alfort, Maisons-Alfort (M. Eloit); Anses, Laboratoire de Ploufragan-Plouzané, Ploufragan, France (N. Rose)

Main Article

Table A1

List of hepatitis E virus reference sequences from Genbank used for phylogenetic analyses of strains identified in France, May 2008–November 2009*

Accession no. Name Host Country Genotype
AF336291 NLSW22 Swine Netherlands 3a
AF082843 swUS1 Swine USA 3a
AF466665 UMC12B Swine USA 3a
AF060668 US-1 Human USA 3a
AB115544 HE-JA23 Human Japan 3b
AB189075 JYO-Hyo03L Human Japan 3b
AB073912 swJ570 Swine Japan 3b
AF336298 NLSW105 Swine Netherlands 3c
AF336290 NLSW20 Swine Netherlands 3c
AF296167 TW3SW Swine Taiwan 3d
AF503512 P143/11/02 Swine UK 3e
AY362357 UK8734 Human UK 3e
AY032758 NLSW50 Swine Netherlands 3f
EU495148 TLS25 Human France 3f
AF195061 VH1 Human Spain 3f
AF455784 Osh205 Swine Kyrgyzstan 3g
FJ705359 wbGER27 Wild boar Germany 3i
AY115488 Arkell Swine Canada 3j
AB108537 CCC220 Human China 4
AB161717 JSM-Sap95 Human Japan 4
FJ610232 swCH189 Swine China 4
AB097811 swJ13-1 Swine Japan 4

*HEV, hepatitis E virus.

Main Article