Volume 17, Number 8—August 2011
Research
Novel Human Reovirus Isolated from Children with Acute Necrotizing Encephalopathy
Louise A. Ouattara, Francis Barin, Marie Anne Barthez, Bertrand Bonnaud, Philippe Roingeard, Alain Goudeau, Pierre Castelnau, Guy Vernet, Gláucia Paranhos-Baccalà
, and Florence Komurian-Pradel
, and Florence Komurian-Pradel
Table 3
Comparison of S1 and S3 genes of MRV2Tou05, a novel human type 2 reovirus, with the most representative mammalian reovirus strains*
| Strain |
GenBank accession no. |
% Similarity to MRV2Tou05 S1 |
% Similarity to MRV2Tou05 S3 |
|||||
|---|---|---|---|---|---|---|---|---|
| S1 |
S3 |
Nucleotide |
Protein |
Nucleotide |
Protein |
|||
| T1C50 | AY862133 | NA | 57 | 50 | NA | NA | ||
| T1N84 | AY862136 | NA | 58 | 53 | NA | NA | ||
| T1N85 | AY862135 | U35346 | 57 | 51 | 98 | 99 | ||
| T1C11 | NA | U35359 | NA | NA | 91 | 98 | ||
| T1C62 | NA | U35356 | NA | NA | 91 | 99 | ||
| T1C23 | AY862134 | NA | 57 | 50 | NA | NA | ||
| T2N73 | AY862137 | U35350 | 67 | 66 | 99 | 99 | ||
| T2N84 | AY862138 | U35347 | 67 | 66 | 98 | 99 | ||
| T2W | DQ220017 | DQ220018 | 66 | 62 | 75 | 88 | ||
| T2302II | EU049604 | NA | 83 | 89 | NA | NA | ||
| T2302I | EU049603 | NA | 83 | 89 | NA | NA | ||
| BYD1 | DQ312301 | DQ664191 | 66 | 67 | 84 | 95 | ||
| SC-A | DQ911244 | DQ411553 | 42 | 25 | 91 | 97 | ||
| T3Co96 | AY302467 | NA | 43 | 28 | NA | NA | ||
| T3A | L37677 | NA | 48 | 25 | 98 | 97 | ||
| T3C18 | L37684 | NA | 42 | 26 | NA | NA | ||
| T3C8 | L37679 | U35355 | 42 | 24 | 85 | 97 | ||
| T3C31 | L37683 | NA | 41 | 25 | NA | NA | ||
| T3C9 | L37676 | U35352 | 40 | 25 | 82 | 97 | ||
| T3C93 | L37675 | NA | 42 | 25 | NA | NA | ||
| T3C44 | L37681 | NA | 42 | 26 | NA | NA | ||
| T3C45 | L37680 | NA | 42 | 25 | NA | NA | ||
| T3C43 | L37682 | NA | 42 | 25 | NA | NA | ||
| T3C84 | L37678 | U35354 | 42 | 25 | 85 | 97 | ||
| T3N83 | NA | U35349 | NA | NA | 85 | 98 | ||
*S, small segment; NA, not available.
Page created: August 24, 2011
Page updated: August 24, 2011
Page reviewed: August 24, 2011
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