Volume 20, Number 4—April 2014
New Alphacoronavirus in Mystacina tuberculata Bats, New Zealand
||No. contigs matching alphacoronaviruses
||Range of contig lengths, bp
||Highest scoring BLASTn hit recorded against alphacoronaviruses|
||Nucleotide identity (%)†
|Open reading frame 1ab||33||182–1054||8 × 10−93||581/828 (77)|
|Spike protein||5||580–1629||1 × 10−19||362/551 (66)|
|Matrix||4||251–840||2 × 10−99||532/746 (71)|
|Nucleocapsid||4||536–890||6 × 10−6||79/109 (72)|
*BLASTn, nucleotide basic local alignment search tool (http://blast.ncbi.nlm.nih.gov/Blast.cgi?PROGRAM=blastn&PAGE_TYPE=BlastSearch&LINK_LOC=blasthome).
†No. nucleotides identical between query and database sequence.
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Page updated: March 18, 2014
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