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Volume 27, Number 9—September 2021
Research

Real-Time Genomics for Tracking Severe Acute Respiratory Syndrome Coronavirus 2 Border Incursions after Virus Elimination, New Zealand

Jordan DouglasComments to Author , Jemma L. Geoghegan, James Hadfield, Remco Bouckaert, Matthew Storey, Xiaoyun Ren, Joep de Ligt, Nigel French, and David Welch
Author affiliations: University of Auckland, Auckland, New Zealand (J. Douglas, R. Bouckaert, D. Welch); University of Otago, Dunedin, New Zealand (J.L. Geoghegan); Institute of Environmental Science and Research Limited, Porirua, New Zealand (J.L. Geoghegan, M. Storey, X. Ren, J. de Ligt); Fred Hutchinson Cancer Research Center, Seattle, Washington, USA (J. Hadfield); Massey University, Palmerston North, New Zealand (N. French); Te Pūnaha Matatini: The Centre for Complex Systems and Networks, New Zealand (D. Welch)

Main Article

Figure

Outbreaks of coronavirus disease (COVID-19) after initial elimination in New Zealand. A) Daily COVID-19 cases, June 2020–April 2021. Alert levels in the Auckland region and across the wider country are indicated. B) Phylogenetic trees of all 13 COVID-19 postelimination community outbreaks. VoCs are indicated. Each subtree displayed is part of the larger phylogenetic tree built from genomes around the world. MIQ, managed isolation and quarantine; VoC, variant of concern.

Figure. Outbreaks of coronavirus disease (COVID-19) after initial elimination in New Zealand. A) Daily COVID-19 cases, June 2020–April 2021. Alert levels in the Auckland region and across the wider country are indicated. B) Phylogenetic trees of all 13 COVID-19 postelimination community outbreaks. VoCs are indicated. Each subtree displayed is part of the larger phylogenetic tree built from genomes around the world. MIQ, managed isolation and quarantine; VoC, variant of concern.

Main Article

Page created: July 08, 2021
Page updated: August 17, 2021
Page reviewed: August 17, 2021
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