Volume 29, Number 12—December 2023
Research
Tecovirimat Resistance in Mpox Patients, United States, 2022–2023
Table 2
Amino acid substitution | Isolates | Patients | EC50, µmol/L | Fold change† |
---|---|---|---|---|
A288P (25,26) | 6 | 4 | 0.5 to >500 | 29 to >29,000 |
A288P, A290V, D294V (26) | 3 | 1 | 0.66 to >500 | 38 to >29,000 |
A288P, A290V, L297ins (26) | 1 | 1 | >500 | >29,000 |
A288P, A290V, I372N | 1 | 1 | 15 | 880 |
A288P, D294V, A295E | 1 | 1 | 1.4 | 83 |
A288P, D294V, D301del (26) | 1 | 1 | >500 | >29,000 |
A288P, I372N | 1 | 1 | >150 | >8,600 |
A290V (25,26) | 9 | 9 | 0.17–43 | 10–2,500 |
A290V, I372N (25) | 5 | 5 | 30–32 | 1,700–1,800 |
A295E | 3 | 3 | 2.0–3.3 | 110–190 |
D100N | 2 | 2 | 0.008 | −2 |
D217N | 11 | 11 | 0.007–0.012 | −2.4 to −1.3 |
D248N | 1 | 1 | 0.007 | −2.4 |
D256N | 3 | 3 | 0.009 | −1.8 |
D283G | 2 | 1 | 7.1–7.3 | 404–420 |
D294V (25) | 8 | 7 | 0.23–1.4 | 13–78 |
D294V, A295E | 1 | 1 | 1 | 59 |
H238Q (25) | 4 | 4 | 0.54–0.6 | 28–34 |
H238Q, A288P, D294V, I372N (25) | 1 | 1 | ≈5.2 | ≈290 |
H238Q, N267D, A295E | 1 | 1 | 24 | 1,400 |
I372N (25) | 12 | 9 | 0.04–>150 | 2.3 to >8600 |
K174N, N267D | 1 | 1 | 12 | 720 |
N267D (25) | 3 | 3 | 10–11 | 570–630 |
N267D, A288P (25,26) | 4 | 3 | 1.2–16 | 71–900 |
N267D, A290V | 1 | 1 | 2.0 | 110 |
N267D, D294V | 1 | 1 | 12 | 680 |
N267D, A288P, A290V, D294V (26) | 1 | 1 | >500 | >29,000 |
N267D, A288P, A290V, A295E, L297ins (26) | 1 | 1 | >500 | >29,000 |
N267D, A288P, A290V, A295E, I372N | 1 | 1 | >500 | >29,000 |
N267del (27) | 8 | 7 | 1.5–4.0 | 85–230 |
N267del, N267D | 1 | 1 | Not tested | |
N267del, N267D, A295E | 2 | 2 | 2.9–18 | 160–1,000 |
N267del, N267D, A288P, A295E | 1 | 1 | Not tested | |
N267del, N267D, D294V, A295E | 1 | 1 | 2.5 | 140 |
N267del, A288P, A295E | 1 | 1 | >500 | >29,000 |
N267del, T289A, A295E | 1 | 1 | 0.26 | 15 |
N267del, A290V | 1 | 1 | 0.13 | 7.5 |
N267del, A290V, I372N | 1 | 1 | 3.1 | 180 |
P243S, A288P, A290V (26) | 1 | 1 | 0.56 | 32 |
S215F, T289A, A290V, I372N | 1 | 1 | Not tested | |
S369L | 3 | 3 | 0.006 | −2.9 |
T245I, A290V | 1 | 1 | 0.17 | 10 |
T289A | 3 | 3 | 0.078–0.14 | 3.7–7.8 |
T289A, I372N | 1 | 1 | Not tested | |
T289A, R291K | 1 | 1 | 1.7 | 98 |
Y258C | 1 | 1 | 18 | 1,000 |
Y285H, I372N | 1 | 1 | 0.045 | 2.6 |
*All specimens belong to MPXV clade IIb lineage B.1 and contain E353K substitution in addition to the listed substitutions. All substitutions detected from a specimen are listed regardless of their proportion in the viral population. Insertions (ins) and deletions (del) were detected in addition to substitutions. EC50, 50% effective concentration; MPXV, monkeypox virus. †Fold change was calculated based on the EC50 of the reference strain MPXV clade IIa (U.S., 2003), which was 0.0175 µmol/L.
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