Volume 30, Number 2—February 2024
Research Letter
Lymphocytic Choriomeningitis Virus Lineage V in Wood Mice, Germany
Figure
![Phylogenetic analysis of the nucleocapsid protein encoding region of lymphocytic choriomeningitis virus lineage V identified in wood mice, Germany (boldface), and reference sequences. Bayesian inference method was used to analyze the 1,674-nt open reading frame corresponding to codons 1–558 without the stop codon. GenBank accession number, strain name, host species, and country of origin (if known) are shown. Roman numerals I–IV represent the different virus lineages as defined previously (10). Lunk virus from Mus minutoides mice was used as an outgroup. WE and Armstrong are laboratory strains of lymphocytic choriomeningitis virus. Scale bar indicates nucleotide substitutions per site. Asyl, Apodemus sylvaticus; AU, Australia; BG, Bulgaria; CN, China; CZ, Czech Republic; DE, Germany; ES, Spain; FR, France; GA, Gabon; GF, French Guiana; JP, Japan; Mm, Mus musculus; Mmm, M. musculus musculus; Mmd, M. musculus domesticus; SK, Slovakia; US, United States; YU, former Yugoslavia.](/eid/images/23-0868-F1.jpg)
Figure. Phylogenetic analysis of the nucleocapsid protein encoding region of lymphocytic choriomeningitis virus lineage V identified in wood mice, Germany (boldface), and reference sequences. Bayesian inference method was used to analyze the 1,674-nt open reading frame corresponding to codons 1–558 without the stop codon. GenBank accession number, strain name, host species, and country of origin (if known) are shown. Roman numerals I–IV represent the different virus lineages as defined previously (10). Lunk virus from Mus minutoides mice was used as an outgroup. WE and Armstrong are laboratory strains of lymphocytic choriomeningitis virus. Scale bar indicates nucleotide substitutions per site. Asyl, Apodemus sylvaticus; AU, Australia; BG, Bulgaria; CN, China; CZ, Czech Republic; DE, Germany; ES, Spain; FR, France; GA, Gabon; GF, French Guiana; JP, Japan; Mm, Mus musculus; Mmm, M. musculus musculus; Mmd, M. musculus domesticus; SK, Slovakia; US, United States; YU, former Yugoslavia.
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1Current affiliation: Friedrich-Loeffler-Institut, Greifswald-Insel Riems, Germany and Justus-Liebig-Universität Gießen, Gießen, Germany.