Volume 8, Number 6—June 2002
Synopsis
Parachlamydiaceae: Potential Emerging Pathogens
Table
Strain | Sample, context and location | Hosta | % 16S rRNA homologyb | Ref | |
---|---|---|---|---|---|
to BN9 | to C. pneumoniaec | ||||
BN9 endosymbiont | Nasal swab of female volunteer, Germany | Acanthamoeba sp. strain BN9 | 100 | 87.6 | 17 |
Berg17 endosymbiont | Nasal swab of female volunteer, Germany | Acanthamoeba maurianiensis | nad | nad | 17 |
Hall’s coccus | Water sample, humidifier fever, Vermont | Acanthamoeba sp. | 99.6 | 87.4 | 16 |
UWE1 endosymbiont | Soil samples, Washington State | Acanthamoeba sp. strainUWE1 | 93.7 | 86.6 | 46 |
UWE25 endosymbiont | Soil samples, Washington State | Acanthamoeba sp. strain UWE25 | 93.2 | 86.8 | 46 |
UWC22 endosymbiont | Infected corneal tissues, Washington State | Acanthamoeba sp. strain UWC22 | 91.3 | 87.3 | 46 |
TUME1 endosymbiont | Municipal sewage sludge, Germany | Acanthamoeba sp. strain TUME1 | 91.0 | 87.2 | 46 |
Neochlamydia hartmannellae | Water system of a dental unit, Germany | Hartmanella vermiformis | 91.5 | 86.8 | 45 |
CorvenA4 | Bronchoalveolar washing, France | nae | 91.4 | 85.0 | 47 |
aBacterial strains were identified in free-living amoebae, isolated by culture on nonnutrient agar.
bEstimated with Clustal W 63 available on the website of Pôle Bio-Informatique Lyonnais, Lyon, France (http://pbil.ibcp.fr/).
c16S rRNA of Chlamydophila pneumoniae strain N16 (GenBank accession number U68426).
dBerg17 endosymbiont was shown to have a similar rRNA signature from Bn9 endosymbiont (binding of the Bn9658 hybridization probe designed for in situ identification of Parachlamydia acanthamoebae); however, the 16S rRNA sequence of that strain is not available.
eDirect polymerase chain reaction amplification and sequencing from DNA extracted from the respiratory sample; no strain was isolated.
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