Volume 11, Number 12—December 2005
Research
Intergenogroup Recombination in Sapoviruses
Grant S. Hansman*, Naokazu Takeda*, Tomoichiro Oka*, Mitsukai Oseto†, Kjell-Olof Hedlund‡, and Kazuhiko Katayama*
Table
Nucleotide identity (%) among sapovirus strains*
| Nonstructural region | Structural region |
|||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Ehime1107 | SW278 | Mc2 | Mc10 | C12 | SK15 | Dresden | Manchester | NK24 | PEC | |
| Ehime1107 | 96.9 | 54.6 | 55.1 | 54.4 | 55.2 | 58.3 | 58.8 | 58.3 | 51.0 | |
| SW278 | 97.5 | 54.6 | 55.2 | 54.0 | 54.7 | 58.1 | 58.3 | 58.3 | 50.8 | |
| Mc2 | 73.8 | 74.0 | 72.7 | 73.0 | 71.8 | 54.5 | 54.0 | 53.7 | 51.2 | |
| Mc10 | 77.5 | 77.6 | 74.4 | 71.5 | 71.1 | 55.3 | 54.6 | 55.2 | 50.7 | |
| C12 | 77.3 | 77.3 | 74.4 | 90.1 | 75.0 | 55.4 | 55.7 | 55.5 | 51.8 | |
| SK15 | 77.5 | 77.5 | 73.3 | 81.0 | 80.3 | 56.2 | 56.1 | 55.5 | 50.4 | |
| Dresden | 62.6 | 62.7 | 63.3 | 63.0 | 63.1 | 62.4 | 92.9 | 57.3 | 52.5 | |
| Manchester | 63.5 | 63.3 | 63.2 | 63.7 | 64.0 | 62.8 | 90.5 | 57.4 | 52.1 | |
| NK24 | 55.4 | 55.6 | 55.8 | 55.7 | 55.0 | 55.2 | 56.3 | 56.8 | 53.3 | |
| PEC | 52.5 | 52.5 | 53.0 | 52.3 | 52.4 | 52.3 | 51.7 | 51.5 | 52.1 | |
*Values on the lower left represent the nonstructural region, i.e., genome start to capsid start; values on the upper right represent the structural region, i.e., capsid start to genome end.
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