Skip directly to site content Skip directly to page options Skip directly to A-Z link Skip directly to A-Z link Skip directly to A-Z link
Volume 11, Number 2—February 2005
Research

Novel Flavivirus or New Lineage of West Nile Virus, Central Europe

Tamás Bakonyi*†, Zdenek Hubálek‡, Ivo Rudolf‡, and Norbert Nowotny*§Comments to Author 
Author affiliations: *University of Veterinary Medicine, Vienna, Austria; †Szent István University, Budapest, Hungary; ‡Institute of Vertebrate Biology ASCR, Brno, Czech Republic; §United Arab Emirates University, Al Ain, United Arab Emirates

Main Article

Table 3

Nucleotide and amino acid identity rates between RabV* and other flaviviruses

Code WNV lineage and clade Identity to RabV (%)
Nucleotide Amino acid
Complete Partial† Complete Partial‡
NY99a 1a 77 78 90 95
NY99b 1a 77 78 90 95
Is98 1a 77 78 90 95
It98 1a 77 78 90 95
Ro96 1a 77 78 90 95
Rus99a 1a 77 78 90 95
Rus99b 1a 77 78 90 95
Tu97 1a 76 78 90 95
Fr00 1a 77 78 90 95
Eg51 1a 77 78 90 95
Chin01 1a 77 78 90 95
Kunjin 1b 75 77 89 94
Sarafend 2 77 78 90 96
Ug37 2 77 78 90 96
Rus98 4 (speculation) 73 77 87 95
JEV – 68 74 75 86
MVEV – 69 74 76 86
USUV – 68 72 75 83
SLEV – – 71 – 78
ALFV – – 74 – 88
CPCV – – 71 – 79
KOUV – – 76 – 90
YAOV – – 75 – 87

*RabV, Rabensburg virus; JEV, Japanese encephalitis virus; MVEV, Murray Valley encephalitis virus; USUV, Usutu virus; SLEV, St. Louis encephalitis virus; ALFV, Alfuy virus; CPCV, Cacipacore virus; KOUV, Koutango virus; YAOV, Yaounde virus.
†Partial alignment between nucleotide positions 9067 and 10101.
‡Partial alignment between amino acid positions 2991 and 3335.

Main Article

Page created: April 28, 2011
Page updated: April 28, 2011
Page reviewed: April 28, 2011
The conclusions, findings, and opinions expressed by authors contributing to this journal do not necessarily reflect the official position of the U.S. Department of Health and Human Services, the Public Health Service, the Centers for Disease Control and Prevention, or the authors' affiliated institutions. Use of trade names is for identification only and does not imply endorsement by any of the groups named above.
file_external