Volume 13, Number 1—January 2007
Research
Panmicrobial Oligonucleotide Array for Diagnosis of Infectious Diseases
Gustavo Palacios*1, Phenix-Lan Quan*1, Omar J. Jabado*, Sean Conlan*, David L. Hirschberg†, Yang Liu‡, Junhui Zhai*, Neil Renwick*, Jeffrey Hui*, Hedi Hegyi*§, Allen Grolla¶, James E. Strong¶, Jonathan S. Towner#, Thomas W. Geisbert**, Peter B. Jahrling††, Cornelia Büchen-Osmond*, Heinz Ellerbrok‡‡, Maria Paz Sanchez-Seco§§, Yves Lussier‡, Pierre Formenty¶¶, Stuart T. Nichol#, Heinz Feldmann¶##, Thomas Briese*, and W. Ian Lipkin*
Table 2
RNA virus isolates from tissue culture samples used to test GreeneChip performance
| Virus | Genus |
|---|---|
| Negative-strand virus | |
| Lake Victoria marburgvirus† | Marburgvirus |
| Zaire ebolavirus‡ | Ebolavirus |
| Sudan ebolavirus‡ | Ebolavirus |
| Reston ebolavirus‡ | Ebolavirus |
| Human respiratory syncytial virus A§ | Pneumovirus |
| Human respiratory syncytial virus B§ | Pneumovirus |
| Human parainfluenza virus 1§ | Respirovirus |
| Human parainfluenza virus 3§ | Respirovirus |
| Newcastle disease virus¶ | Avulavirus |
| Vesicular stomatitis Indiana virus¶ | Vesiculovirus |
| Bovine ephemeral fever virus¶ | Ephemerovirus |
| Influenza A virus (H5N1)# | Orthomyxovirus |
| Influenza B virus§ | Orthomyxovirus |
| Guanarito virus‡ | Arenavirus |
| Machupo virus‡ | Arenavirus |
| Junin virus‡ | Arenavirus |
| Lassa virus strain Josiah‡ | Arenavirus |
| Lassa virus strain Weller‡ | Arenavirus |
| Positive-strand virus | |
| Human enterovirus B (E25)§ | Enterovirus |
| Human enterovirus A (HEV71)§ | Enterovirus |
| Human enterovirus B (E14)§ | Enterovirus |
| Human enterovirus B (E30)§ | Enterovirus |
| Vesicular exanthema of swine virus¶ | Vesivirus |
| SARS* coronavirus** | Coronavirus |
| Human coronavirus OC43§ | Coronavirus |
| Human coronavirus 229E§ | Coronavirus |
| Dengue virus 1# | Flavivirus |
| Dengue virus 2# | Flavivirus |
| Dengue virus 3# | Flavivirus |
| Dengue virus 4# | Flavivirus |
| Yellow fever virus# | Flavivirus |
| West Nile virus** | Flavivirus |
| Saint Louis encephalitis virus** | Flavivirus |
| Alfuy virus†† | Flavivirus |
| Murray Valley encephalitis virus†† | Flavivirus |
| Chikungunya virus# | Alphavirus |
| Sindbis virus¶ | Alphavirus |
| Double-strand virus | |
| Bluetongue virus¶ | Orbivirus |
| Epizootic hemorrhagic disease virus-2¶ | Orbivirus |
*SARS, severe acute respiratory syndrome.
†Centers for Disease Control and Prevention, Atlanta, GA, USA.
‡US Army Medical Research Institute of Infectious Diseases, Fort Detrick, Frederick, MD, USA.
§American Type Culture Collection, Manassas, VA, USA.
¶Commonwealth Scientific and Industrial Research Organization, Melbourne, Victoria, Australia.
#Centro Nacional de Microbiologica, Madrid, Spain.
**Columbia University, New York, NY, USA.
††Curtin Institute of Technology, Perth, Western Australia, Australia.
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Page updated: June 28, 2010
Page reviewed: June 28, 2010
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