Volume 15, Number 3—March 2009
Research
Characterization of Avian Influenza Viruses A (H5N1) from Wild Birds, Hong Kong, 2004–2008
Table
Virus | Clade† | Ferret antisera titers to: |
||||||
---|---|---|---|---|---|---|---|---|
VNM1203‡ (clade 1) | IDN5 (clade 2.1) | CDC357 (clade 2.1) | MNG244 (clade 2.2) | HN101 (clade 2.3.1) | VNM1455 (clade 2.3.2) | Anhui1 (clade 2.3.4) | ||
VNM1203 | 1 | 640 | 40 | <40 | <40 | 80 | 40 | 80 |
Dk/Hunan/795/2002 | 2.1 | 80 | 640 | 320 | 160 | 160 | 160 | <40 |
IDN5 | 2.1 | 40 | 1,280 | 640 | 80 | 40 | 160 | 160 |
CDC357 | 2.1 | 80 | 2,560 | 1,280 | 160 | 80 | 320 | 320 |
BHG/Qinghai/1A/2005 | 2.2 | 40 | 320 | 160 | 320 | 160 | 80 | 40 |
HN101 | 2.3.1 | 40 | 640 | 160 | 640 | 640 | 320 | 80 |
CPH/HK/18/2005 | 2.3.2 | <40 | 40 | <40 | 40 | 80 | <40 | <40 |
VNM1455 | 2.3.2 | 40 | 160 | 160 | 160 | 160 | 320 | <40 |
Pfalcon/HK/5211/2006 | 2.3.2 | <40 | 320 | 160 | 40 | 80 | 160 | <40 |
Common magpie/HK/5052/2007 | 2.3.2 | <40 | 320 | 160 | 160 | 80 | 320 | <40 |
Common buzzard/HK/9213/2007 | 2.3.2 | <40 | 160 | 80 | 80 | 80 | 160 | <40 |
Little egret/HK/8863/2007 | 2.3.2 | <40 | 160 | 80 | 160 | 80 | 320 | <40 |
BCN heron/HK/659/2008 | 2.3.2 | <40 | 160 | 80 | 80 | 80 | 320 | <40 |
Magpie robin/HK/109720/08 | 2.3.2 | <40 | 320 | 160 | 320 | 160 | 640 | <40 |
Ck/Guiyang/3570/2005 | 2.3.3 | 160 | 160 | 40 | 160 | 640 | 160 | 640 |
Dk/Fujian/1734/2005 | 2.3.4 | 80 | 160 | 80 | <40 | 80 | 40 | 640 |
JWE/HK/1038/2006 | 2.3.4 | 80 | 320 | 160 | 40 | 640 | 320 | 1,280 |
SB munia/HK/2572/2007 | 2.3.4 | 80 | 80 | 40 | <40 | 80 | <40 | 640 |
Pfalcon/HK/2142/2008 | 2.3.4 | 80 | <40 | <40 | <40 | <40 | <40 | 40 |
Pfalcon/HK/D0028/2004 | 9 | 320 | 80 | 40 | <40 | 80 | <40 | 160 |
*VNM1203, Vietnam/1203/2004; IDN5, Indonesia/5/2005; CDC357, Indonesia/CDC357/2006; MNG244, whooper swan/Mongolia/244/2005; HN101, duck/Hunan/101/2004; VNM1455, muscovy duck/Vietnam/1455/2006; Anhui1, Anhui/1/2005; Dk, duck; BHG, bar-headed goose; CPH, Chinese pond heron; HK, Hong Kong; Pfalcon, peregrine falcon; BCN heron, black-crowned night heron; Ck, chicken; JWE, Japanese white-eye; SB munia, scaly-breasted munia. Boldface numbers indicate titers to prototype viruses.
†Clade designations according to the World Health Organization influenza (H5N1) nomenclature system (21).
‡Ferret antisera dilution started at 1:40.
References
- Li KS, Guan Y, Wang J, Smith GJ, Xu KM, Duan L, Genesis of a highly pathogenic and potentially pandemic H5N1 influenza virus in eastern Asia. Nature. 2004;430:209–13. DOIPubMedGoogle Scholar
- Food and Agricultural Organization of the United Nations. FOAAIDEnews. Avian influenza disease emergency. Situation update 55. 2008 [cited 2008 Aug 28]. Available from http://www.fao.org/docs/eims/upload//246457/aj097e00.pdf
- World Health Organization Global Influenza Program Surveillance Network. Evolution of H5N1 avian influenza viruses in Asia. Emerg Infect Dis. 2005;11:1515–21.PubMedGoogle Scholar
- Guan Y, Peiris JS, Lipatov AS, Ellis TM, Dyrting KC, Krauss S, Emergence of multiple genotypes of H5N1 avian influenza viruses in Hong Kong SAR. Proc Natl Acad Sci U S A. 2002;99:8950–5. DOIPubMedGoogle Scholar
- Tumpey TM, Suarez DL, Perkins LEL, Senne DA, Lee JG, Lee YJ, Characterization of a highly pathogenic H5N1 avian influenza A virus isolated from duck meat. J Virol. 2002;76:6344–55. DOIPubMedGoogle Scholar
- Chen H, Smith GJD, Zhang SY, Qin K, Wang J, Li KS, H5N1 virus outbreak in migratory waterfowl. Nature. 2005;436:191–2. DOIPubMedGoogle Scholar
- Chen H, Smith GJ, Li KS, Wang J, Fan XF, Rayner JM, Establishment of multiple sub-lineages of H5N1 influenza virus in Asia—implications for pandemic control. Proc Natl Acad Sci U S A. 2006;103:2845–50. DOIPubMedGoogle Scholar
- Smith GJ, Naipospos TS, Nguyen TD, de Jong MD, Vijaykrishna D, Usman TB, Evolution and adaptation of H5N1 influenza virus in avian and human hosts in Indonesia and Vietnam. Virology. 2006;350:258–68. DOIPubMedGoogle Scholar
- Tran TH, Nguyen TL, Nguyen TD, Luong TS, Pham PM, Nguyen VC, Avian influenza A (H5N1) in 10 patients in Vietnam. N Engl J Med. 2004;350:1179–88. DOIPubMedGoogle Scholar
- Lee CW, Suarez DL, Tumpey TM, Sung HW, Kwon YK, Lee YJ, Characterization of highly pathogenic H5N1 avian influenza A viruses isolated from South Korea. J Virol. 2005;79:3692–702. DOIPubMedGoogle Scholar
- Mase M, Tsukamoto K, Imada T, Imai K, Tanimura N, Nakamura K, Characterization of H5N1 influenza A viruses isolated during the 2003–2004 influenza outbreaks in Japan. Virology. 2005;332:167–76. DOIPubMedGoogle Scholar
- Lee YJ, Choi YK, Kim YJ, Song MS, Jeong OM, Lee EK, Highly pathogenic avian influenza virus (H5N1) in domestic poultry and relationship with migratory birds, South Korea. Emerg Infect Dis. 2008;14:487–90. DOIPubMedGoogle Scholar
- Sims LD. Experience in control of avian influenza in Asia. Dev Biol (Basel). 2007;130:39–43.PubMedGoogle Scholar
- Ellis TM, Bousfield RB, Bissett LA, Dyrting KC, Luk GSM, Tsim ST, Investigation of outbreaks of highly pathogenic H5N1 avian influenza in waterfowl and wild birds in Hong Kong in late 2002. Avian Pathol. 2004;33:492–505. DOIPubMedGoogle Scholar
- Sims LD, Ellis TM, Liu KK, Dyrting K, Wong H, Peiris M, Avian influenza in Hong Kong 1997–2002. Avian Dis. 2003;47(Suppl):832–8. DOIPubMedGoogle Scholar
- Sims LD, Guan Y, Ellis TM, Liu KK, Dyrting K, Wong H, An update on avian influenza in Hong Kong 2002. Avian Dis. 2003;47(Suppl):1083–6. DOIPubMedGoogle Scholar
- Ellis TM, Dyrting KC, Wong CW, Chadwick B, Chan C, Chiang M, Analysis of H5N1 avian influenza infections from wild bird surveillance in Hong Kong from January 2006 to October 2007. Avian Pathol. In press.
- Smith GJD, Fan XH, Wang J, Li KS, Qin K, Zhang JX, Emergence and predominance of an H5N1 influenza variant in China. Proc Natl Acad Sci U S A. 2006;103:16936–41. DOIPubMedGoogle Scholar
- Guan Y, Poon LLM, Cheung CY, Ellis TM, Lim W, Lipatov AS, H5N1 influenza: a protean pandemic threat. Proc Natl Acad Sci U S A. 2004;101:8156–61. DOIPubMedGoogle Scholar
- Viney C, Phillipps K, Ying LC. Birds of Hong Kong and South China, 7th ed. Hong Kong: Government Printer; 1996.
- World Health Organization. Towards a unified nomenclature system for the highly pathogenic H5N1 avian influenza viruses. 2007 [cited 2008 May 21]. Available from http://www.who.int/csr/disease/avian_influenza/guidelines/nomenclature/en
- Duan L, Bahl J, Smith GJ, Wang J, Vijaykrishna D, Zhang LJ, The development and genetic diversity of H5N1 influenza virus in China, 1996–2006. Virology. 2008;380:243–54. DOIPubMedGoogle Scholar
- Spackman E, Senne DA, Myers TJ, Bulaga LL, Garber LP, Perdue ML, Development of a real-time reverse transcriptase PCR assay for type A influenza virus and the avian H5 and H7 hemagglutinin subtypes. J Clin Microbiol. 2002;40:3256–60. DOIPubMedGoogle Scholar
- Guan Y, Shortridge KF, Krauss S, Chin PS, Dyrting KC, Ellis TM, H9N2 influenza viruses possessing H5N1-like internal genomes continue to circulate in poultry in southeastern China. J Virol. 2000;74:9372–80. DOIPubMedGoogle Scholar
- Bao Y, Bolotov P, Dernovoy D, Kiryutin B, Zaslavsky L, Tatusova T, The influenza virus resource at the National Center for Biotechnology Information. J Virol. 2008;82:596–601. DOIPubMedGoogle Scholar
- Nylander JAA. MrModelTest version 2. Evolutionary Biology Centre, Uppsala University, Uppsala, Sweden. 2004 [cited 2008 May 21] Available from http://www.abc.se/~nylander
- Swofford DL. PAUP*: phylogenetic analysis using parsimony (and other methods) 4.0 beta. Sunderland (MA): Sinauer Associates; 2001.
- Huelsenbeck JP, Ronquist FR. MrBayes: Bayesian inference of phylogenetic trees. Bioinformatics. 2001;17:754–5. DOIPubMedGoogle Scholar
- Ha Y, Stevens DJ, Skehel JJ, Wiley DC. X-ray structures of H5 avian and H9 swine influenza virus hemagglutinins bound to avian and human receptor analogs. Proc Natl Acad Sci U S A. 2001;98:11181–6. DOIPubMedGoogle Scholar
- Stevens J, Blixt O, Tumpey TM, Taubenberger JK, Paulson JC, Wilson IA. Structure and receptor specificity of the hemagglutinin from an H5N1 influenza virus. Science. 2006;312:404–10. DOIPubMedGoogle Scholar
- Yamada S, Suzuki Y, Suzuki T, Le MQ, Nidom CA, Tagawa YS, Hemagglutinin mutations responsible for the binding of H5N1 influenza A viruses to human type receptors. Nature. 2006;444:378–82. DOIPubMedGoogle Scholar
- Wang J, Vijaykrishna D, Duan L, Bahl J, Zhang JX. Identification of the progenitors of Indonesia and Vietnam avian influenza A (H5N1) viruses from southern China. J Virol. 2008;82:3405–14. DOIPubMedGoogle Scholar
- Treanor JJ, Hayden FG, Vrooman PS, Barbarash R, Bettis R, Riff D, Efficacy and safety of the oral neuraminidase inhibitor oseltamivir in treating acute influenza: a randomized controlled trial. JAMA. 2000;283:1016–24. DOIPubMedGoogle Scholar
- Cheung CL, Rayner JM, Smith GJD, Wang P, Naipospos TSP, Zhang J, Distribution of amantadine-resistant H5N1 avian influenza variants in Asia. J Infect Dis. 2006;193:1626–9. DOIPubMedGoogle Scholar
- Roberton SI, Bell DJ, Smith GJ, Nicholls JM, Chan KH, Nguyen DT, Avian Influenza H5N1 in viverrids: implications for wildlife health and conservation. Proc Biol Sci. 2006;273:1729–32. DOIPubMedGoogle Scholar
- Dung Nguyen T, Vinh Nguyen T, Vijaykrishna D, Webster RG, Guan Y, Malik PJS, Multiple sublineages of influenza A virus (H5N1), Vietnam, 2005–2007. Emerg Infect Dis. 2008;14:632–6. DOIPubMedGoogle Scholar
- Starick E, Beer M, Hoffmann B, Staubach C, Werner O, Globig A, Phylogenetic analyses of highly pathogenic avian influenza virus isolates from Germany in 2006 and 2007 suggest at least three separate introductions of H5N1 virus. Vet Microbiol. 2008;128:243–52. DOIPubMedGoogle Scholar
- World Health Organization. Antigenic and genetic characteristics of H5N1 viruses and candidate H5N1 vaccine viruses developed for potential use as human vaccines. 2008 [cited 2008 May 21]. Available from http://www.who.int/csr/disease/avian_influenza/guidelines/h5n1virus/en/index.html
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