Skip directly to site content Skip directly to page options Skip directly to A-Z link Skip directly to A-Z link Skip directly to A-Z link
Volume 16, Number 5—May 2010
Dispatch

Unusual Assortment of Segments in 2 Rare Human Rotavirus Genomes

Simona De GraziaComments to Author , Giovanni M. Giammanco, Christiaan A. Potgieter, Jelle Matthijnssens, Krisztián Bányai, Maria A. Platia, Claudia Colomba, and Vito Martella
Author affiliations: University of Palermo, Palermo, Italy (S. De Grazia, G.M. Giammanco, M.A. Platia, C. Colomba); Ondersterpoort Veterinary Institute, Ondersterpoort, South Africa (C.A. Potgieter); Rega Institute for Medical Research, Leuven, Belgium (J. Matthiinssens); Veterinary Medical Research Institute, Budapest, Hungary (K. Bányai); University of Bari, Valenzano, Italy (V. Martella)

Main Article

Table 2

Complete genomic constellations of the 2 G3P[9] Italian viruses sequenced together with several human P[14], ruminant, and feline rotaviruses and reference human strains Wa, DS-1, and AU-1*

Strain VP7 VP4 VP6 VP1 VP2 VP3 NSP1 NSP2 NSP3 NSP4 NSP5
Hu/Ita/PA169 G6 P[14] I2 R2 C2 M2 A3 N2 T6 E2 H3
Hu/Hung/Hun5 G6 P[14] I2 R2 C2 M2 A11 N2 T6 E2 H3
Hu/B10925 G6 P[14] I2 R2 C2 M2 A3 N2 T6 E2 H3
Hu/MG6 G6 P[14] I2 R2 C2 M2 A11 N2 T6 E2 H3
Hu/111/05 G6 P[14] I2 R2 C2 M2 A3 N2 T6 E2 H3
Ov/OVR762 G8 P[14] I2 R2 C2 M2 A11 N2 T6 E2 H3
Gu/Arg/Chubut G8 P[14] I2 R5 C2 M2 A3 N2 T6 E2 H3
Bo/RF G6 P[5] I2 R2 C2 M2 A3 N2 T6 E2 H3
Bo/NCDV G6 P[1] I2 R2 C2 M2 ? N2 T6 E2 H3
Hu/Ita/PAI58/96 G3 P[9] I2 R2 C2 M2 A3 N2 T6 E2 H3
Hu/Ita/PAH136/96 G3 P[9] I2 R2 C2 M2 A3 N1 T6 E2 H3
Fe/Cat-2 G3 P[9] I3 R3 C2 M3 A3 N1 T6 E3 H3
Fe/Cat-97 G3 P[3] I3 R3 C2 M3 A9 N2 T3 E3 H6
Ca/CU-1 G3 P[3] I3 R3 C2 M3 A9 N2 T3 E3 H6
Ca/Ro1845 G3 P[3] I3 R3 C2 M3 A9 N2 T3 E3 H6
Ca/K9 G3 P[3] I3 R3 C2 M3 A9 N2 T3 E3 H6
Ca/A79–10 G3 P[3] I3 R3 C2 M3 A9 N2 T3 E3 H6
Hu/HCR3A G3 P[3] I3 R3 C2 M3 A9 N2 T3 E3 H6
Hu/AU-1 G3 P[9] I3 R3 C3 M3 A3 N3 T3 E3 H3
Hu/DS-1 G2 P[4] I2 R2 C2 M2 A2 N2 T2 E2 H2
Hu/Wa G1 P[8] I1 R1 C1 M1 A1 N1 T1 E1 H1

*Gray shading indicates genetic relationships with respect to the G3P[9] Italian viruses, according to the patterns of segregation displayed in the phylogenetic analyses in the Technical Appendix. Boldface indicates complete genomic constellations of the 2 G3P[9] Italian viruses sequenced in this study. VP, structural protein; NSP, nonstructural protein.

Main Article

Page created: December 23, 2010
Page updated: December 23, 2010
Page reviewed: December 23, 2010
The conclusions, findings, and opinions expressed by authors contributing to this journal do not necessarily reflect the official position of the U.S. Department of Health and Human Services, the Public Health Service, the Centers for Disease Control and Prevention, or the authors' affiliated institutions. Use of trade names is for identification only and does not imply endorsement by any of the groups named above.
file_external