Volume 16, Number 9—September 2010
Dispatch
Human Herpesvirus 8 Genotype E in Patients with Kaposi Sarcoma, Peru
Table A1
ID IP | Age, y/sex | Origin | Lesion | No. lesions | Biopsy site | HIV status | Clinical diagnosis | Level of spindle cells infiltration | Perls | CD 34 | LANA-1 | VR1 PCR† |
VR2 PCR |
Subtype by molecular analysis | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VR1 outer | VR1 inner | VR2 outer | VR2 inner | ||||||||||||||
04/0480 | 51/M | Mestizo | Nodule | 1 | Neck | + | AIDS KS | ++ | +++ | ++ | ++ | + E | + E | – | + E | E | |
04/0484 | 29/M | Mestizo | Nodule | Multiple | Nose | + | AIDS KS | +++ | ++ | ++ | ++ | + C | + C | – | – | C | |
04/0485 | 29/M | Mestizo | Nodule | Multiple | Head | + | AIDS KS | +++ | + | ++ | ++ | + C | + C | – | + C | C | |
04/0489 | 32/M | Mestizo | Macula | 1 | Hard palate | + | AIDS KS | ++ | ++ | ++ | + | – | + B | – | + B | B | |
04/0492 | 34/F | Mestizo | Macula | Multiple | Face | + | AIDS KS | +++ | +++ | ++ | ++ | + A | + A | – | + A | A | |
04/0497 | 32/M | Mestizo | Patch | Multiple | Chest | + | AIDS KS | +++ | +++ | ++ | ++ | – | + C | – | +‡ | C | |
06/0749 | 35/F | Mestizo | Macula | Multiple | Hard palate | + | AIDS KS | + | + | + | + | + C | + C | – | – | C | |
06/0750 | 35/M | Mestizo | Macula, nodule | Multiple | Hard palate | + | AIDS KS | ++ | ++ | + | ++ | – | +‡ C | – | – | C | |
06/0758 | 37/M | Mestizo | Nodule | 1 | Eyelid | + | AIDS KS | + | ++ | ++ | +/− | – | + A | – | – | A | |
06/0772 | 24/M | Mestizo | Papula, nodule | Multiple | Upper limb | + | AIDS KS | + | + | + | + | + E | + E | + E | + E | E | |
04/0479 | 83/F | Mestizo | Papula | 1 | Lower limb | – | Classic KS | +++ | + | + | ++ | – | + C | – | + C | C | |
04/0482 | 75/M | Mestizo | Nodule | Multiple | Hand | – | Classic KS | +++ | +++ | ++ | ++ | +‡ | + C | – | + C | C | |
04/0487 | 70/F | Quechua | Nodule | 1 | Foot | – | Classic KS | +++ | +++ | + | ++ | – | + C | – | + C | C | |
04/0488 | 75/M | Mestizo | Nodule | Multiple | Foot | – | Classic KS | +++ | ++ | + | ++ | – | + C | – | + C | C | |
04/0498 | 75/M | Quechua | Nodule | 1 | Foot | – | Classic KS | +++ | +++ | ++ | ++ | + A | + A | + A | + A | A | |
06/0733 | 58/M | Mestizo | Macula | Multiple | Hard palate | – | Classic KS | – | - | + | +/− | – | + C | – | – | C | |
06/0739 | 46/M | Mestizo | Patch | Multiple | Upper limb | – | Classic KS | + | +/− | ++ | ++ | – | + A | – | + A | A | |
06/0741 | 30/M | Mestizo | Nodule | 1 | Face | – | Classic KS | +++ | + | ++ | +++ | + A | + A | + A | +‡ | A | |
06/0743 | 30/M | Mestizo | Nodule | Multiple | Face | – | Classic KS | ++ | ++ | + | ++ | + C | + C | – | – | C | |
06/0745 | 31/M | Mestizo | Papula, nodule | Multiple | Lower limb | – | Classic KS | + | + | + | + | – | + C | – | – | C | |
06/0751 | 26/M | Quechua | Macula | 1 | Hard palate | – | Classic KS | +++ | +++ | + | ++ | + C | + C | – | +‡ | C | |
06/0754 | 63/F | Mestizo | Nodule | Multiple | Neck | – | Classic KS | ++ | +/− | +++ | +++ | + A | + A | – | +‡ | A | |
06/0767 | 76/F | Quechua | Nodule | 1 | Lower limb | – | Classic KS | – | – | +++ | – | – | + C | + C | + C | C | |
04/0491 | 63/F | Mestizo | Nodule | ND | Foot | – | ND | ++ | + | + | ++ | – | +‡ A | – | +‡ A | A | |
04/0494 | 75/F | ND | Nodule | ND | Foot | – | ND | ++ | ++ | + | ++ | + A | + A | – | – | A |
*KS, Kaposi sarcoma; VR1 and VR2, variable region 1 or 2 of the open reading frame K1 of HHV-8; HHV-8, human herpesvirus 8; ID IP, identification of the specimen given by the Institut Pasteur pathologic unit; LANA, latency-associated nuclear antigen; AIDS KS, KS occurring with HIV-1 infection; –, no amplification product. ND, not determined.
†For VR1, the first PCR was performed with the primer set VR1S (ATCCTTGCCAAYATCCTGGTATTGBAA) / VR1AS1 (ACGATTTGACAGGCGAGACGACAGC) (amplification of 373 bp) and followed by a nested PCR with a second set of primers VR1S/VR1AS2 (ACAATRCAAAGTAACABGCTGRCC) for the amplification of a 220-bp fragment. For VR2 amplification, the first PCR was performed by using the primer set VR2S (TCTCGCCTGTCAAATCBTMTATGT) / VR2AS1(AGTACCAMTCCACTGGTTGYGTAT) amplification of 314 bp and followed by a nested PCR with a second set of primers VR2S/VR2AS2 (AGTTCCTAMGATACCAMACATGGTT) for the amplification of a 240–300-bp fragment. Amplified PCR products of the appropriate size were then purified from gel, cloned, sequenced as previously described (14). Sequences were verified on both DNA strands.
‡Weak PCR signal.
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1These authors contributed equally to this article.