Volume 17, Number 6—June 2011
Dispatch
Possible Novel Nebovirus Genotype in Cattle, France
Jérôme Kaplon, Eric Guenau, Philippe Asdrubal, Pierre Pothier, and Katia Ambert-Balay
Table 1
Genogroup III norovirus nt and aa identities calculated on the 3′ end polymerase*
| Variable |
Group 1, France |
Group 2, France |
Bo/Jena/80/DE (genotype 1) |
Bo/Newbury2/76/UK (genotype 2) |
|||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| nt identity |
aa identity |
nt identity |
aa identity |
nt identity |
aa identity |
nt identity |
aa identity |
||||
| Group 1 (25 strains) | 80.4–100 | 94.6–100 | 71.3–78.0 | 84.6–90.4 | 83.4–90.8 | 96.4–100 | 71.7–76.8 | 85.6–88.5 | |||
| Group 2 (64 strains) | 71.3–78.0 | 84.6–90.4 | 83.6–100 | 97.6–100 | 72.0–76.1 | 85.6–88.5 | 82.8–91.9 | 97.6–100 | |||
*Identity expressed as a percentage calculated by using MEGA 4.0 (www.megasoftware.net). nt, nucleotide; aa, amino acid.
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Page updated: August 03, 2011
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