Volume 18, Number 3—March 2012
Research
Ocozocoautla de Espinosa Virus and Hemorrhagic Fever, Mexico
Maria N.B. Cajimat, Mary Louise Milazzo, Robert D. Bradley, and Charles F. Fulhorst
Table
Nonidentities among amino acid sequences of glycoprotein precursors and amino acid sequences of nucleocapsid proteins of Ocozocoautla de Espinosa virus strain AV B1030026, Mexico, and 8 arenaviruses from South America*
| Virus | % Amino acid sequence nonidentity |
||||||||
|---|---|---|---|---|---|---|---|---|---|
| OCEV | AMAV | CHPV | CPXV | GTOV | JUNV | MACV | SABV | TCRV | |
| OCEV | – | 43.7 | 45.1 | 44.8 | 46.5 | 31.6 | 33.5 | 46.8 | 24.7 |
| AMAV | 27.7 | – | 44.8 | 30.4 | 29.9 | 42.0 | 42.3 | 46.0 | 45.3 |
| CHPV | 31.6 | 27.3 | – | 43.3 | 43.9 | 42.7 | 42.8 | 22.3 | 45.1 |
| CXPV | 27.7 | 17.1 | 28.4 | – | 31.2 | 45.2 | 44.8 | 43.5 | 45.7 |
| GTOV | 27.0 | 14.6 | 27.9 | 17.1 | – | 43.0 | 44.2 | 44.8 | 45.9 |
| JUNV | 16.1 | 26.3 | 30.3 | 27.1 | 25.2 | – | 29.3 | 44.6 | 32.6 |
| MACV | 17.9 | 25.7 | 29.1 | 25.9 | 23.7 | 12.2 | – | 43.6 | 34.9 |
| SABV | 32.3 | 27.7 | 16.2 | 29.3 | 29.5 | 29.9 | 28.3 | – | 47.4 |
| TCRV | 18.8 | 29.8 | 31.2 | 30.5 | 28.7 | 21.3 | 20.4 | 33.0 | – |
*Nonidentities (p model distances) among sequences of glycoprotein precursors are listed above the diagonal and those among sequences of nucleocapsid proteins below the diagonal. OCEV, Ocozocoautla de Espinosa virus; AMAV, Amaparí virus strain BeAn 70563; CHPV, Chaparé virus, 200001071; CPXV, Cupixi virus, BeAn 119303; GTOV, Guanarito virus, INH-95551; JUNV, Junín virus, XJ13; MACV, Machupo virus, Carvallo; SABV, Sabiá virus, SPH 114202; TCRV, Tacaribe virus, TRVL 11573.
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