Volume 21, Number 6—June 2015
Research
Dose-Response Relationship between Antimicrobial Drugs and Livestock-Associated MRSA in Pig Farming1
Table 5
Characteristic |
All farms |
Open farms |
Closed farms |
|||||
---|---|---|---|---|---|---|---|---|
No.† |
OR (95% CI) |
No.† |
OR (95% CI) |
No.† |
OR (95% CI) |
|||
Farm | ||||||||
No. sows, 300 increase§ | 1,421 | 1.4 (0.7–2.7) | 867 | 1.3 (0.8–2.2) | 554 | 2.6 (0.7–9.7) | ||
External supply of gilts | ||||||||
Open | 867 | 6.6 (2.3–19.0)¶ | 867 | Not computable | 0 | Not computable | ||
Closed | 554 | Ref | 0 | 554 | ||||
Type of production | ||||||||
Farrow-to-finish | 945 | 0.4 (0.1–1.6) | 511 | 0.7 (0.3–1.6) | 434 | 0.4 (0.0–17.7) | ||
Farrowing | 476 | Ref | 356 | Ref | 120 | Ref | ||
Farm treatment plan | ||||||||
Yes | 1,157 | 0.7 (0.4–1.3) | 723 | 0.6 (0.3–1.1) | 434 | 2.1 (0.6–7.1) | ||
No | 190 | Ref | 110 | Ref | 80 | Ref | ||
Water supply for animals | ||||||||
Public, from tap | 452 | 2.8 (1.3–6.0)# | 218 | 0.8 (0.4–1.8) | 234 | 7.7 (2.5–24)# | ||
Private from private source | 929 | Ref | 619 | Ref | 310 | Ref | ||
Separate medication pipe | ||||||||
Yes | 920 | 0.4 (0.2–0.7)# | 526 | 0.4 (0.2–0.7)# | 394 | 0.8 (0.2–3.7) | ||
No |
441 |
– |
311 |
Ref |
130 |
Ref |
||
Biosecurity | ||||||||
Different compartments per production phase | ||||||||
Yes | 880 | 0.9 (0.5–1.6) | 600 | 1.7 (0.8–3.8) | 280 | 0.4 (0.2–1.1) | ||
No | 521 | Ref | 257 | Ref | 264 | Ref | ||
Boarding platform for sows | ||||||||
Yes | 512 | 0.7 (0.4–1.4) | 358 | 1.3 (0.7–2.6) | 154 | 0.2 (0.1–1.0) | ||
No | 909 | Ref | 509 | Ref | 400 | Ref | ||
Clearly defined border of boarding platform | ||||||||
Yes | 989 | 0.7 (0.4–1.3) | 569 | 1.1 (0.6–1.9) | 420 | 0.2 (0.1–0.6)# | ||
No | 432 | Ref | 298 | Ref | 134 | Ref | ||
Carcass barrels cleaned and disinfected after emptied | ||||||||
Yes | 527 | 0.5 (0.3–1.0)** | 317 | 0.4 (0.2–0.8)# | 210 | 1.6 (0.5–5.1) | ||
No | 864 | Ref | 530 | Ref | 334 | Ref | ||
Delivery room for materials | ||||||||
Yes | 1,031 | 0.4 (0.2–0.7)** | 677 | 0.5 (0.2–1.0)** | 354 | 0.3 (0.1–0.6)# | ||
No | 320 | Ref | 140 | Ref | 180 | Ref | ||
Pigs go outside when moved | ||||||||
Yes | 627 | 0.8 (0.4–1.6) | 367 | 1.4 (0.8–2.6) | 274 | 0.2 (0.1–0.8)** | ||
No | 744 | Ref | 470 | Ref | 260 | Ref | ||
Workers’ overalls washed | ||||||||
Yes | 687 | 0.8 (0.5–1.4) | 317 | 1.2 (0.7–2.1) | 370 | 0.3 (0.1–1.2) | ||
No | 734 | Ref | 550 | Ref | 184 | Ref | ||
Removal of manure in winter | ||||||||
Manure stays <6 mo | 1,007 | 1.2 (0.7–2.0) | 647 | 0.8 (0.5–1.5) | 360 | 2.9 (1.0–8.9) | ||
Manure stays >6 mo |
380 |
Ref |
186 |
Ref |
194 |
Ref |
||
Animal management and contact structure | ||||||||
Injection of piglets with antimicrobial drugs during the first week. | ||||||||
Yes | 830 | 2.0 (1.2–3.3)# | 610 | 1.4 (0.8–2.5) | 220 | 3.7 (1.6–8.6)# | ||
No | 571 | Ref | 257 | Ref | 314 | Ref | ||
Tooth clipping in piglets | ||||||||
Yes | 516 | 3.2 (1.4–7.0)** | 34,650 | 3.0 (1.5–6.2)# | 170 | 4.0 (0.5–30.6) | ||
No | 875 | Ref | 1 | Ref | 374 | Ref | ||
Vaccination of piglets and/or fatteners | ||||||||
Yes | 1,090 | 2.5 (1.4–4.5)** | 690 | 2.0 (1.1–3.4)** | 400 | 7.2 (1.6–32)** | ||
No | 311 | Ref | 167 | Ref | 144 | Ref | ||
Needles for vaccination renewed per compartment | ||||||||
Yes | 848 | 1.9 (1.2–3.1)** | 508 | 1.7 (1.0–2.7)** | 340 | 2.1 (0.4–12.1) | ||
No | 456 | Ref | 312 | Ref | 144 | Ref | ||
Some piglets reared motherless | ||||||||
Yes | 385 | 1.3 (0.7–2.3) | 311 | 1.6 (0.9–2.7) | 74 | 0.2 (0.0–0.9)** | ||
No | 1,026 | Ref | 546 | Ref | 480 | Ref | ||
Sows in stable groups | ||||||||
Yes | 772 | 0.5 (0.3–0.8)# | 432 | 0.6 (0.3–1.0) | 340 | 0.5 (0.2–1.1) | ||
No |
619 |
Ref |
405 |
Ref |
214 |
Ref |
||
Hygiene | ||||||||
In the piglet section | ||||||||
Disinfectant | 189 | 0.3 (0.2–0.7)# | 139 | 0.3 (0.1–0.7)# | 50 | 0.9 (0.1–5.9) | ||
Soaking agent | 280 | 2.0 (1.0–4.4) | 180 | 3.1 (1.3–7.5)** | 100 | 0.1 (0.0–0.8)** | ||
Disinfectant + soaking agent | 698 | 1.2 (0.6–2.3) | 408 | 1.4 (0.6–3.1) | 290 | 0.8 (0.3–2.5) | ||
None | 254 | Ref | 140 | Ref | 114 | Ref | ||
In the mating section | ||||||||
Disinfectant + soaking agent | 239 | 0.6 (0.3–1.1) | 89 | 0.3 (0.1–0.8)** | 150 | 2.2 (0.6–7.7) | ||
None | 1,182 | Ref | 778 | Ref | 404 | Ref | ||
In the gilt section | ||||||||
Soaking agent | 220 | 1.0 (0.5–2.0) | 100 | 1.5 (0.7–3.6) | 120 | 0.3 (0.1–1.1) | ||
Disinfectant + soaking agent | 585 | 1.0 (0.6–1.6) | 335 | 1.0 (0.6–1.7) | 250 | 1.3 (0.5–3.9) | ||
None | 616 | Ref | 432 | Ref | 184 | Ref |
*Fits for the univariate adjusted models in all farms: −2 log RSPL estimations ranged from a minimum of 6386.56 to a maximum of 7016.07. Results from the longitudinal analysis with generalized linear mixed models taking into account the repeated measurements design and adjusted for age group of the pool. Variables with p<0.1 in the overall analysis or in at least 1 stratum (open or closed) are presented. OR and p values are in bold type when p<0.1. Farms were defined as open when they received external supplies of gilts ≥1 time per year from at least 1 supplier and as closed when they received no external supply of gilts. MRSA, methicillin-resistant Staphylococcus aureus; OR, odds ratio; Ref, reference category; RSPL, residual pseudo-likelihood.
†Number of observations at all sampling times together (10 pooled pig samples per farm in 36 farms in 4 sampling times). Some variables have missing observations.
§Items evaluated irrespective of significance.
¶p<0.001.
#p<0.01.
**p<0.05.
1Preliminary results from this study were presented at the 3rd American Society for Microbiology–European Society of Clinical Microbiology and Infectious Diseases (ASM-ESCMID) Conference on Methicillin-resistant Staphylococci in Animals: Veterinary Public Health Implications, 2013 November 4–7, Copenhagen, Denmark (oral presentation, speaker abstract S7:3); and at the Society for Veterinary Epidemiology and Preventive Medicine annual meeting, 2014 March 26–28, Dublin, Ireland (poster presentation).