Volume 23, Number 7—July 2017
Dispatch
Novel Pestivirus Species in Pigs, Austria, 2015
Table
BLAST analysis of the 12 putative mature proteins and the polyprotein of novel pestivirus Linda virus from pigs with congenital tremor, Austria, 2015*
Putative mature protein | Amino acid region | Best BLAST hit (GenBank accession no.) | Alignment coverage, % | E-value | Identity, % |
---|---|---|---|---|---|
Npro | 1–182 | BV (YP_008992092.1) | 96 | 4 × 10–64 | 60 |
Core | 183–283 | BV (YP_008992092.1) | 95 | 3 × 10–43 | 83 |
Erns | 284–504 | BV (YP_008992092.1) | 100 | 5 × 10–117 | 74 |
E1 | 505–702 | BV (YP_008992092.1) | 100 | 3 × 10–82 | 67 |
E2 | 703–1077 | BV (YP_008992092.1) | 98 | 4 × 10–140 | 53 |
P7 | 1078–1152 | BV (YP_008992092.1) | 100 | 1 × 10–25 | 60 |
NS2 | 1153–1608 | BV (YP_008992092.1) | 99 | 0.0 | 63 |
NS3 | 1609–2291 | BV (YP_008992092.1) | 100 | 0.0 | 85 |
NS4A | 2292–2354 | BV (YP_008992092.1) | 100 | 2 × 10–28 | 81 |
NS4B | 2355–2701 | BV (YP_008992092.1) | 100 | 0.0 | 78 |
NS5A | 2702–3205 | BV (YP_008992092.1) | 100 | 0.0 | 53 |
NS5B | 3206–3923 | BV (YP_008992092.1) | 99 | 0.0 | 73 |
*BV, Bungowannah virus; E, envelope; NS, nonstructural.