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Volume 25, Number 11—November 2019
Research

Comparison of Whole-Genome Sequences of Legionella pneumophila in Tap Water and in Clinical Strains, Flint, Michigan, USA, 2016

Emily Garner, Connor L. Brown, David Otto Schwake, William J. Rhoads, Gustavo Arango-Argoty, Liqing Zhang, Guillaume Jospin, David A. Coil, Jonathan A. Eisen, Marc A. Edwards, and Amy PrudenComments to Author 
Author affiliations: West Virginia University, Morgantown, West Virginia, USA (E. Garner); Virginia Polytechnic Institute and State University, Blacksburg, Virginia, USA (E. Garner, C.L. Brown, W.J. Rhoads, G. Arango-Argoty, L. Zhang, M.A. Edwards, A. Pruden); Methodist University, Fayetteville, North Carolina, USA (D.O. Schwake); University of California at Davis, Davis, California, USA (G. Jospin, D.A. Coil, J.A. Eisen)

Main Article

Figure

Single-nucleotide polymorphism (SNP) analysis of isolates from study of Legionella pneumophila in tap water, Flint, Michigan, USA. Analysis was conducted in kSNP3.0 (https://sourceforge.net/projects/ksnp/) and visualized by using FigTree 14.3 (https://github.com/rambaut/figtree/releases/tag/v1.4.3). Isolate sources: yellow, clinical samples; blue, hospital water; red, residence water; purple, public building water; green, buildings supplied by well water. With the exception of buildings supplied

Figure. Single-nucleotide polymorphism (SNP) analysis of isolates from study of Legionella pneumophila in tap water, Flint, Michigan, USA. Analysis was conducted in kSNP3.0 (https://sourceforge.net/projects/ksnp/) and visualized by using FigTree 14.3 (https://github.com/rambaut/figtree/releases/tag/v1.4.3). Isolate sources: yellow, clinical samples; blue, hospital water; red, residence water; purple, public building water; green, buildings supplied by well water. With the exception of buildings supplied by well water, all buildings were serviced by Flint municipal water. Reference strains are detailed in Appendix 1 Table 2. Scale bar indicates nucleotide substitutions per site.

Main Article

Page created: October 15, 2019
Page updated: October 15, 2019
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