Volume 26, Number 5—May 2020
Synopsis
Biphasic Outbreak of Invasive Group A Streptococcus Disease in Eldercare Facility, New Zealand
Table
Isolate name | Sample date | Specimen type | Source | Region | SRA biosample accession no. |
---|---|---|---|---|---|
DMG1800704 | 2014 May | Hip joint† | Outbreak, resident | South Island | SAMN10160123 |
DMG1800705 | 2014 May | Blood† | Outbreak, resident | South Island | SAMN10160124 |
DMG1800706 | 2014 May | Blood | Outbreak, resident | South Island | SAMN10160125 |
DMG1800707 | 2014 May | Blood | Outbreak, resident | South Island | SAMN10160126 |
DMG1800708 | 2014 Jun | Throat | Outbreak, resident | South Island | SAMN10160127 |
DMG1800709 | 2014 Jun | Throat‡ | Outbreak, resident | South Island | SAMN10160128 |
DMG1800710 | 2014 Jun | Leg ulcer‡ | Outbreak, resident | South Island | SAMN10160129 |
DMG1800711 | 2014 Jun | Leg lesion | Outbreak, resident | South Island | SAMN10160130 |
DMG1800712 | 2014 Jun | Elbow lesion | Outbreak, resident | South Island | SAMN10160131 |
DMG1800713 | 2014 Jun | Fingernail | Outbreak, staff | South Island | SAMN10160132 |
DMG1800714 | 2014 Jun | Hand | Outbreak, staff | South Island | SAMN10160133 |
DMG1800715 | 2014 Jul | Throat | Outbreak, staff | South Island | SAMN10160134 |
DMG1800716§ | 2014 Aug | Blood | Outbreak, resident | South Island | SAMN10160135 |
DMG1800717 | 2014 Aug | Leg wound | Outbreak, resident | South Island | SAMN10160136 |
DMG1800718 | 2014 Aug | Foot ulcer | Outbreak, resident | South Island | SAMN10160137 |
DMG1800719 | 2014 Aug | Finger | Outbreak, staff | South Island | SAMN10160138 |
DMG1800720 | 2014 Aug | Blood | Outbreak, resident | South Island | SAMN10160139 |
DMG2000217 | 2014 Aug | Wound | Outbreak, resident | South Island | SAMN14177818 |
DMG1800721 | 2012 Jan | Blood | Nonoutbreak | Not recorded | SAMN10160140 |
DMG1800722 | 2012 Jan | Throat | Nonoutbreak | Not recorded | SAMN10160141 |
DMG1800723 | 2013 Jan | Throat | Nonoutbreak | Not recorded | SAMN10160142 |
DMG1800724 | 2013 Jan | Blood | Nonoutbreak | Not recorded | SAMN10160143 |
DMG1800725 | 2014 Jan | Blood | Nonoutbreak | Not recorded | SAMN10160144 |
DMG1800726 | 2002 Jan | Blood | Nonoutbreak | South Island | SAMN10160145 |
DMG1800727 | 2003 Jan | Blood | Nonoutbreak | North Island | SAMN10160146 |
DMG1800728 | 2003 Jan | Blood | Nonoutbreak | North Island | SAMN10160147 |
DMG1800729 | 2003 Jan | Blood | Nonoutbreak | North Island | SAMN10160148 |
DMG1800730 | 2005 Jan | Blood | Nonoutbreak | South Island | SAMN10160149 |
DMG1800731 | 2005 Aug | Blood | Nonoutbreak | North Island | SAMN10160150 |
DMG1800732 | 2006 Jan | Blood | Nonoutbreak | North Island | SAMN10160151 |
DMG1800733 | 2006 Sep | Blood | Nonoutbreak | South Island | SAMN10160152 |
DMG1800734 | 2006 Sep | Blood | Nonoutbreak | North Island | SAMN10160153 |
DMG1800735 | 2007 Jun | Blood | Nonoutbreak | South Island | SAMN10160154 |
DMG1800736 | 2007 Jun | Blood | Nonoutbreak | South Island | SAMN10160155 |
DMG1800737 | 2007 Jun | Blood | Nonoutbreak | North Island | SAMN10160156 |
DMG1800738 | 2008 May | Blood | Nonoutbreak | South Island | SAMN10160157 |
DMG1800739 | 2010 May | Blood | Nonoutbreak | North Island | SAMN10160158 |
DMG1800740 | 2010 May | Blood | Nonoutbreak | North Island | SAMN10160159 |
DMG1800741 | 2010 May | Blood | Nonoutbreak | North Island | SAMN10160160 |
DMG1800742 | 2001 Feb | Blood | Nonoutbreak | North Island | SAMN10160161 |
DMG1800743 | 2011 Feb | Blood | Nonoutbreak | North Island | SAMN10160162 |
DMG1800744 | 2011 Mar | Blood | Nonoutbreak | North Island | SAMN10160163 |
DMG1800745 | 2012 May | Blood | Nonoutbreak | North Island | SAMN10160164 |
DMG1800746 | 2012 May | Blood | Nonoutbreak | North Island | SAMN10160165 |
DMG1800747 | 2012 Jun | Blood | Nonoutbreak | North Island | SAMN10160166 |
DMG1800748 | 2013 Jan | Blood | Nonoutbreak | North Island | SAMN10160167 |
DMG1800749 | 2013 Feb | Blood | Nonoutbreak | North Island | SAMN10160168 |
DMG1800750 | 2013 Mar | Blood | Nonoutbreak | North Island | SAMN10160169 |
DMG1800751 | 2013 Jul | Throat | Nonoutbreak | North Island | SAMN10160170 |
DMG1800752 | 2013 Dec | Blood | Nonoutbreak | North Island | SAMN10160171 |
DMG1800753 | 2014 May | Throat | Nonoutbreak | North Island | SAMN10160172 |
DMG1800754 | 2014 Jun | Blood | Nonoutbreak | North Island | SAMN10160173 |
DMG1800755 | 2014 Jul | Aspirate | Nonoutbreak | South Island | SAMN10160174 |
DMG1800756 | 2014 Sep | Blood | Nonoutbreak | North Island | SAMN10160175 |
DMG1800757 | 2014 Nov | Blood | Nonoutbreak | North Island | SAMN10160176 |
*SRA, National Center for Biotechnology Information sequence read archive (https://www.ncbi.nlm.nih.gov/sra).
†Isolates with this symbol are from the same resident.
‡Isolates with this symbol are from the same resident.
§Reference genome.
1These authors contributed equally to this article.
Page created: April 16, 2020
Page updated: April 16, 2020
Page reviewed: April 16, 2020
The conclusions, findings, and opinions expressed by authors contributing to this journal do not necessarily reflect the official position of the U.S. Department of Health and Human Services, the Public Health Service, the Centers for Disease Control and Prevention, or the authors' affiliated institutions. Use of trade names is for identification only and does not imply endorsement by any of the groups named above.