Volume 26, Number 5—May 2020
Synopsis
Biphasic Outbreak of Invasive Group A Streptococcus Disease in Eldercare Facility, New Zealand
Table
Details of Streptococcus pyogenes emm81 strains in study of biphasic outbreak of invasive group A Streptococcus disease in eldercare facility, New Zealand*
Isolate name | Sample date | Specimen type | Source | Region | SRA biosample accession no. |
---|---|---|---|---|---|
DMG1800704 | 2014 May | Hip joint† | Outbreak, resident | South Island | SAMN10160123 |
DMG1800705 | 2014 May | Blood† | Outbreak, resident | South Island | SAMN10160124 |
DMG1800706 | 2014 May | Blood | Outbreak, resident | South Island | SAMN10160125 |
DMG1800707 | 2014 May | Blood | Outbreak, resident | South Island | SAMN10160126 |
DMG1800708 | 2014 Jun | Throat | Outbreak, resident | South Island | SAMN10160127 |
DMG1800709 | 2014 Jun | Throat‡ | Outbreak, resident | South Island | SAMN10160128 |
DMG1800710 | 2014 Jun | Leg ulcer‡ | Outbreak, resident | South Island | SAMN10160129 |
DMG1800711 | 2014 Jun | Leg lesion | Outbreak, resident | South Island | SAMN10160130 |
DMG1800712 | 2014 Jun | Elbow lesion | Outbreak, resident | South Island | SAMN10160131 |
DMG1800713 | 2014 Jun | Fingernail | Outbreak, staff | South Island | SAMN10160132 |
DMG1800714 | 2014 Jun | Hand | Outbreak, staff | South Island | SAMN10160133 |
DMG1800715 | 2014 Jul | Throat | Outbreak, staff | South Island | SAMN10160134 |
DMG1800716§ | 2014 Aug | Blood | Outbreak, resident | South Island | SAMN10160135 |
DMG1800717 | 2014 Aug | Leg wound | Outbreak, resident | South Island | SAMN10160136 |
DMG1800718 | 2014 Aug | Foot ulcer | Outbreak, resident | South Island | SAMN10160137 |
DMG1800719 | 2014 Aug | Finger | Outbreak, staff | South Island | SAMN10160138 |
DMG1800720 | 2014 Aug | Blood | Outbreak, resident | South Island | SAMN10160139 |
DMG2000217 | 2014 Aug | Wound | Outbreak, resident | South Island | SAMN14177818 |
DMG1800721 | 2012 Jan | Blood | Nonoutbreak | Not recorded | SAMN10160140 |
DMG1800722 | 2012 Jan | Throat | Nonoutbreak | Not recorded | SAMN10160141 |
DMG1800723 | 2013 Jan | Throat | Nonoutbreak | Not recorded | SAMN10160142 |
DMG1800724 | 2013 Jan | Blood | Nonoutbreak | Not recorded | SAMN10160143 |
DMG1800725 | 2014 Jan | Blood | Nonoutbreak | Not recorded | SAMN10160144 |
DMG1800726 | 2002 Jan | Blood | Nonoutbreak | South Island | SAMN10160145 |
DMG1800727 | 2003 Jan | Blood | Nonoutbreak | North Island | SAMN10160146 |
DMG1800728 | 2003 Jan | Blood | Nonoutbreak | North Island | SAMN10160147 |
DMG1800729 | 2003 Jan | Blood | Nonoutbreak | North Island | SAMN10160148 |
DMG1800730 | 2005 Jan | Blood | Nonoutbreak | South Island | SAMN10160149 |
DMG1800731 | 2005 Aug | Blood | Nonoutbreak | North Island | SAMN10160150 |
DMG1800732 | 2006 Jan | Blood | Nonoutbreak | North Island | SAMN10160151 |
DMG1800733 | 2006 Sep | Blood | Nonoutbreak | South Island | SAMN10160152 |
DMG1800734 | 2006 Sep | Blood | Nonoutbreak | North Island | SAMN10160153 |
DMG1800735 | 2007 Jun | Blood | Nonoutbreak | South Island | SAMN10160154 |
DMG1800736 | 2007 Jun | Blood | Nonoutbreak | South Island | SAMN10160155 |
DMG1800737 | 2007 Jun | Blood | Nonoutbreak | North Island | SAMN10160156 |
DMG1800738 | 2008 May | Blood | Nonoutbreak | South Island | SAMN10160157 |
DMG1800739 | 2010 May | Blood | Nonoutbreak | North Island | SAMN10160158 |
DMG1800740 | 2010 May | Blood | Nonoutbreak | North Island | SAMN10160159 |
DMG1800741 | 2010 May | Blood | Nonoutbreak | North Island | SAMN10160160 |
DMG1800742 | 2001 Feb | Blood | Nonoutbreak | North Island | SAMN10160161 |
DMG1800743 | 2011 Feb | Blood | Nonoutbreak | North Island | SAMN10160162 |
DMG1800744 | 2011 Mar | Blood | Nonoutbreak | North Island | SAMN10160163 |
DMG1800745 | 2012 May | Blood | Nonoutbreak | North Island | SAMN10160164 |
DMG1800746 | 2012 May | Blood | Nonoutbreak | North Island | SAMN10160165 |
DMG1800747 | 2012 Jun | Blood | Nonoutbreak | North Island | SAMN10160166 |
DMG1800748 | 2013 Jan | Blood | Nonoutbreak | North Island | SAMN10160167 |
DMG1800749 | 2013 Feb | Blood | Nonoutbreak | North Island | SAMN10160168 |
DMG1800750 | 2013 Mar | Blood | Nonoutbreak | North Island | SAMN10160169 |
DMG1800751 | 2013 Jul | Throat | Nonoutbreak | North Island | SAMN10160170 |
DMG1800752 | 2013 Dec | Blood | Nonoutbreak | North Island | SAMN10160171 |
DMG1800753 | 2014 May | Throat | Nonoutbreak | North Island | SAMN10160172 |
DMG1800754 | 2014 Jun | Blood | Nonoutbreak | North Island | SAMN10160173 |
DMG1800755 | 2014 Jul | Aspirate | Nonoutbreak | South Island | SAMN10160174 |
DMG1800756 | 2014 Sep | Blood | Nonoutbreak | North Island | SAMN10160175 |
DMG1800757 | 2014 Nov | Blood | Nonoutbreak | North Island | SAMN10160176 |
*SRA, National Center for Biotechnology Information sequence read archive (https://www.ncbi.nlm.nih.gov/sra).
†Isolates with this symbol are from the same resident.
‡Isolates with this symbol are from the same resident.
§Reference genome.
1These authors contributed equally to this article.