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Volume 28, Number 4—April 2022
Synopsis

Phylogenetic Analysis of Spread of Hepatitis C Virus Identified during HIV Outbreak Investigation, Unnao, India

Arati Mane, Sunitha Manjari Kasibhatla, Pallavi Vidhate, Vandana Saxena, Sandip Patil, Amrita Rao, Amit Nirmalkar, Urmila Kulkarni-Kale, and Samiran PandaComments to Author 
Author affiliations: Indian Council of Medical Research–National AIDS Research Institute, Pune, India (A. Mane, P. Vidhate, V. Saxena, S. Patil, A. Rao, A, Nirmalkar, S. Panda); Savitribai Phule Pune University Bioinformatics Centre, Pune (S.M. Kasibhatla, U. Kulkarni-Kale); Centre for Development of Advanced Computing High Performance Computing–Medical and Bioinformatics Applications Group, Pune (S.M. Kasibhatla); Indian Council of Medical Research, New Delhi, India (S. Panda)

Main Article

Figure 3

Time to most recent common ancestor estimated using hepatitis C virus (HCV) NS5B gene sequences of isolates from HCV antibody–positive persons identified during HIV outbreak investigation, Unnao, India. Red indicates samples with HIV–HCV coinfection; blue indicates samples with HCV monoinfection. Mean estimated time to most recent common ancestor of HCV isolates with the respective 95% highest posterior density interval is 2012 (2008–2014), with posterior probability value of 1. GenBank accession numbers are provided for reference sequences. Scale bar indicates branch lengths. I, HIV–HCV co-infection; IC, HCV monoinfection.

Figure 3. Time to most recent common ancestor estimated using hepatitis C virus (HCV) NS5B gene sequences of isolates from HCV antibody–positive persons identified during HIV outbreak investigation, Unnao, India. Red indicates samples with HIV–HCV coinfection; blue indicates samples with HCV monoinfection. Mean estimated time to most recent common ancestor of HCV isolates with the respective 95% highest posterior density interval is 2012 (2008–2014), with posterior probability value of 1. GenBank accession numbers are provided for reference sequences. Scale bar indicates branch lengths. I, HIV–HCV co-infection; IC, HCV monoinfection.

Main Article

Page created: February 15, 2022
Page updated: March 21, 2022
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