New Genotype of Coxiella burnetii Causing Epizootic Q Fever Outbreak in Rodents, Northern Senegal
Joa Mangombi-Pambou, Laurent Granjon, Clément Labarrere, Mamadou Kane, Youssoupha Niang, Pierre-Edouard Fournier, Jérémy Delerce, Florence Fenollar, and Oleg Mediannikov
Author affiliations: Centre Interdisciplinaire de Recherches Médicales de Franceville, Franceville, Gabon (J. Mangombi-Pambou); Aix-Marseille University, Marseille, France (J. Mangombi-Pambou, C. Labarrere, P.-E. Fournier, J. Delerce, F. Fenollar, O. Mediannikov); University Hospital Institute Méditerranée Infection, Marseille (J. Mangombi-Pambou, C. Labarrere, P.-E. Fournier, F. Fenollar, O. Mediannikov); Centre de Biologie pour la Gestion des Populations, Montpellier, France (L. Granjon); Biologie des Populations Animales Sahelo-Soudaniennes, Dakar, Senegal (M. Kane, Y. Niang)
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Figure
Figure. Neighbor-joining circular unrooted tree showing the relationship between Coxiella burnetii genotypes described in study of new genotype of C. burnetii causing epizootic Q fever outbreak in rodents, northern Senegal. MST75 and MST76 (red) were compared with genotypes already found in Senegal, MST19 and MST6 (blue), and other genotypes. The analysis involved 64 nt sequences. All positions containing gaps and missing data were eliminated. There were a total of 4,692 positions in the final dataset. Evolutionary analyses were conducted in MEGA7 (https://www.megasoftware.net). MST, multispacer sequence typing.
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