Volume 29, Number 5—May 2023
Research Letter
New Genotype of Coxiella burnetii Causing Epizootic Q Fever Outbreak in Rodents, Northern Senegal
Table
Species | No. | Is1111 positive, no. (%) | Profile of spacers |
Genotype | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cox2 | Cox5 | Cox18 | Cox20 | Cox22 | Cox37 | Cox51 | Cox56 | Cox57 | Cox61 | ||||
Arvicanthis niloticus |
29 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
Desmodilliscus braueri |
3 |
1 (33.3) |
3 |
14 |
6 |
6 |
5 |
4 |
10 |
10 |
13 |
5 |
MST75 |
Gerbillus nancillus |
9 |
3 (33.3) |
3 |
14 |
6 |
6 |
5 |
4 |
10 |
10 |
13 |
5 |
MST75 |
G. nigeriae† |
71 |
20 (28.2) |
3 |
14 |
6 |
6 |
5 |
4 |
10 |
20/21‡ |
13 |
5 |
MST75/ MST76‡ |
Jaculus jaculus |
4 |
1 (25) |
3 |
14 |
6 |
6 |
5 |
4 |
10 |
10 |
13 |
5 |
MST75 |
Taterillus spp. |
8 |
3 (37.5) |
3 |
14 |
6 |
6 |
5 |
.4 |
10 |
10 |
13 |
5 |
MST75 |
Xerus erythropus |
1 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
Total | 125 | 28 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA |
*MST, multispacer sequence typing; NA, not applicable. †Invasive (expanding) species. ‡Genotype MST76 has the same profile as MST75 except for Cox 56.
Page created: February 23, 2023
Page updated: April 19, 2023
Page reviewed: April 19, 2023
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