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Volume 30, Number 11—November 2024
CME ACTIVITY - Synopsis

Clinical and Genomic Epidemiology of Coxsackievirus A21 and Enterovirus D68 in Homeless Shelters, King County, Washington, USA, 2019–2021

Sarah N. CoxComments to Author , Amanda M. Casto, Nicholas M. Franko, Eric J. Chow, Peter D. Han, Luis Gamboa, Brian Pfau, Hong Xie, Kevin Kong, Jaydee Sereewit, Melissa A. Rolfes, Emily Mosites, Timothy M. Uyeki, Alexander L. Greninger, Marco Carone, M. Mia Shim, Trevor Bedford, Jay Shendure, Michael Boeckh, Janet A. Englund, Lea M. Starita, Pavitra Roychoudhury, and Helen Y. Chu
Author affiliation: University of Washington, Seattle, Washington, USA (S.N. Cox, A.M. Casto, N.M. Franko, E.J. Chow, H. Xie, K. Kong, J. Sereewit, A.L. Greninger, M.M. Shim, T. Bedford, J. Shendure, M. Boeckh, J.A. Englund, L.M. Starita, P. Roychoudhury, H.Y. Chu); Public Health Seattle and King County, Seattle (E.J. Chow, M.M. Shim); Brotman Baty Institute for Precision Medicine, Seattle (P.D. Han, L. Gamboa, B. Pfau, T. Bedford, J. Shendure, L.M. Starita); Centers for Disease Control and Prevention, Atlanta, Georgia, USA (M.A. Rolfes, E. Mosites, T.M. Uyeki); Fred Hutchinson Cancer Research Center, Seattle (A.L. Greninger, M. Carone, T. Bedford, M. Boeckh, P. Roychoudhury); Howard Hughes Medical Institute, Seattle (T. Bedford, J. Shendure); Seattle Children’s Research Institute, Seattle (J.A. Englund)

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Figure 4

Phylogenetic tree of sequenced enterovirus D68 specimens of homeless shelter residents, King County, Washington, USA, October 2019–November 2019. Tips representing study specimens are colored according to shelter. Light gray tips represent enterovirus D68 genomes downloaded from GenBank. Inset shows a detailed view of the relationship among the study genomes. The x-axis represents the number of nucleotide changes in the genome relative to an enterovirus D68 reference genome (GenBank accession no. NC_038308.1).

Figure 4. Phylogenetic tree of sequenced enterovirus D68 specimens of homeless shelter residents, King County, Washington, USA, October 2019–November 2019. Tips representing study specimens are colored according to shelter. Light gray tips represent enterovirus D68 genomes downloaded from GenBank. Inset shows a detailed view of the relationship among the study genomes. The x-axis represents the number of nucleotide changes in the genome relative to an enterovirus D68 reference genome (GenBank accession no. NC_038308.1).

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Page created: September 06, 2024
Page updated: December 06, 2024
Page reviewed: December 06, 2024
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