Disclaimer: Early release articles are not considered as final versions. Any changes will be reflected in the online version in the month the article is officially released.
Volume 31, Number 2—February 2025
Synopsis
Two Human Cases of Fatal Meningoencephalitis Associated with Potosi and Lone Star Virus Infections, United States, 2020–2023
Table
Case-patient and test performed | Sample type | Test site | No. tests | Result |
---|---|---|---|---|
Case-patient 1 | ||||
Bacterial, fungal, or AFB culture | CSF, blood | C, T | 4 | Negative |
Mayo autoimmune or neoplastic panel | CSF, serum | Mayo | 6 | Negative |
Cryptococcal antigen | CSF, serum | C | 3 | Negative |
Neurosyphilis test | CSF, serum | C | 3 | Negative |
FilmArray M/E panel | CSF | C | 3 | Negative |
HIV-1 serologic test | Serum | C | 1 | Negative |
Lyme disease serologic test | Serum | C | 1 | Negative |
Hepatitis A–C serologic test | Serum | C | 1 | Negative |
WNV PCR | CSF | T | 1 | Negative |
HSV-1/2 PCR | CSF | T | 1 | Negative |
VZV PCR | CSF | T | 1 | Negative |
HHV-6 PCR | CSF | T | 1 | Negative |
Parvovirus B19 PCR | CSF | T | 1 | Negative |
Toxoplasma gondii PCR | CSF | T | 1 | Negative |
Histoplasma capsulatum PCR | CSF | T | 1 | Negative |
H. capsulatum IgG or IgM | CSF, serum | T | 2 | Negative |
Coccidioides IgG or IgM | CSF, serum | T | 2 | Negative |
Adenovirus PCR | CSF | T | 1 | Negative |
(1,3)-𝛽-D glucan assay | CSF, serum | T | 2 | Negative |
Cytologic test | CSF | T | 1 | Negative |
mNGS pathogen diagnosis | CSF | UCSF | 2 | POTV detected; reads from all 3 segments (S, M, and L) |
mNGS |
CSF |
CDC |
1 |
POTV detected; reads from 2 segments (S and L) |
Case-patient 2 | ||||
Bacterial, fungal, or AFB culture | CSF, blood | T | 3 | Negative |
Mayo autoimmune/neoplastic panel | CSF, serum | Mayo | 1 | Elevated GAD65 antibody in serum† |
Cryptococcal antigen | CSF, serum | C | 3 | Negative |
Histoplasma urinary antigen | Urine | T | 1 | Negative |
Lyme disease serologic test | Serum | T | 1 | Negative |
Babesia spp. PCR | CSF | T | 1 | Negative |
Toxoplasma gondii PCR | CSF | T | 1 | Negative |
Histoplasma capsulatum PCR | CSF | T | 1 | Negative |
H. capsulatum IgG or IgM | CSF, serum | T | 2 | Negative |
WNV PCR | CSF | T | 1 | Negative |
HSV-1/2 PCR | CSF | T | 1 | Negative |
FilmArray M/E panel | CSF | T | 1 | Negative |
VZV PCR | CSF | T | 1 | Negative |
HHV-6 PCR | CSF | T | 1 | Negative |
mNGS pathogen diagnosis | CSF | UCSF | 2 | LSV detected; reads from all 3 segments (S, M, and L) |
Virus isolation | CSF | CDC | 1 | Negative |
mNGS | CSF | CDC | 1 | Negative (no reads to LSV) |
PRNT | CSF, serum | CDC | 1 | Negative |
*AFB, acid-fast bacilli; C, community hospital; CDC, Centers for Disease Control and Prevention; HHV-6, human herpesvirus 6; HSV, herpes simplex virus; GAD65, glutamic acid decarboxylase 65; L, large; LSV, Lone star virus; M, medium; M/E, meningitis/encephalitis; Mayo, Mayo Clinic; mNGS, metagenomic next-generation sequencing; POTV, Potosi virus; PRNT, plaque reduction neutralizing testing; S, small; T, tertiary care hospital; UCSF, University of California San Francisco; VZV, varicella zoster virus; WNV, West Nile virus. †0.37 nmol/L (reference range <0.02 nmol/L).
References
- Boshra H. An overview of the infectious cycle of bunyaviruses. Viruses. 2022;14:2139. DOIPubMedGoogle Scholar
- Soldan SS, González-Scarano F. Emerging infectious diseases: the Bunyaviridae. J Neurovirol. 2005;11:412–23. DOIPubMedGoogle Scholar
- Miller S, Naccache SN, Samayoa E, Messacar K, Arevalo S, Federman S, et al. Laboratory validation of a clinical metagenomic sequencing assay for pathogen detection in cerebrospinal fluid. Genome Res. 2019;29:831–42. DOIPubMedGoogle Scholar
- Wilson MR, Sample HA, Zorn KC, Arevalo S, Yu G, Neuhaus J, et al. Clinical metagenomic sequencing for diagnosis of meningitis and encephalitis. N Engl J Med. 2019;380:2327–40. DOIPubMedGoogle Scholar
- Katoh K, Standley DM. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 2013;30:772–80. DOIPubMedGoogle Scholar
- Guindon S, Dufayard JF, Lefort V, Anisimova M, Hordijk W, Gascuel O. New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Syst Biol. 2010;59:307–21. DOIPubMedGoogle Scholar
- Elliott RM. Orthobunyaviruses: recent genetic and structural insights. Nat Rev Microbiol. 2014;12:673–85. DOIPubMedGoogle Scholar
- Armstrong PM, Andreadis TG, Anderson JF, Main AJ. Isolations of Potosi virus from mosquitoes (Diptera: Culicidae) collected in Connecticut. J Med Entomol. 2005;42:875–81. DOIPubMedGoogle Scholar
- Dieme C, Maffei JG, Diarra M, Koetzner CA, Kuo L, Ngo KA, et al. Aedes Albopictus and Cache Valley virus: a new threat for virus transmission in New York State. Emerg Microbes Infect. 2022;11:741–8. DOIPubMedGoogle Scholar
- Kokernot RH, Calisher CH, Stannard LJ, Hayes J. Arbovirus studies in the Ohio-Mississippi Basin, 1964-1967. VII. Lone Star virus, a hitherto unknown agent isolated from the tick Amblyomma americanum (Linn). Am J Trop Med Hyg. 1969;18:789–95. DOIPubMedGoogle Scholar
- Swei A, Russell BJ, Naccache SN, Kabre B, Veeraraghavan N, Pilgard MA, et al. The genome sequence of Lone Star virus, a highly divergent bunyavirus found in the Amblyomma americanum tick. PLoS One. 2013;8:
e62083 . DOIPubMedGoogle Scholar - Waggoner JJ, Soda EA, Deresinski S. Rare and emerging viral infections in transplant recipients. Clin Infect Dis. 2013;57:1182–8. DOIPubMedGoogle Scholar
- Matsuno K, Weisend C, Travassos da Rosa AP, Anzick SL, Dahlstrom E, Porcella SF, et al. Characterization of the Bhanja serogroup viruses (Bunyaviridae): a novel species of the genus Phlebovirus and its relationship with other emerging tick-borne phleboviruses. J Virol. 2013;87:3719–28. DOIPubMedGoogle Scholar
- McMullan LK, Folk SM, Kelly AJ, MacNeil A, Goldsmith CS, Metcalfe MG, et al. A new phlebovirus associated with severe febrile illness in Missouri. N Engl J Med. 2012;367:834–41. DOIPubMedGoogle Scholar
- Levy BS, Patz JA. Climate change and public health. Second edition. New York: Oxford University Press; 2024.
- Liu S, Kannan S, Meeks M, Sanchez S, Girone KW, Broyhill JC, et al. Fatal case of heartland virus disease acquired in the mid-Atlantic region, United States. Emerg Infect Dis. 2023;29:992–6. DOIPubMedGoogle Scholar
- DeBiasi RL, Tyler KL. Polymerase chain reaction in the diagnosis and management of central nervous system infections. Arch Neurol. 1999;56:1215–9. DOIPubMedGoogle Scholar
- Bohl JA, Lay S, Chea S, Ahyong V, Parker DM, Gallagher S, et al. Discovering disease-causing pathogens in resource-scarce Southeast Asia using a global metagenomic pathogen monitoring system. Proc Natl Acad Sci U S A. 2022;119:
e2115285119 . DOIPubMedGoogle Scholar - Benoit P, Brazer N, de Lorenzi-Tognon M, Kelly E, Servellita V, Oseguera M, et al. Seven-year performance of a clinical metagenomic next-generation sequencing test for diagnosis of central nervous system infections. Nat Med. 2024;30:3522–33. DOIPubMedGoogle Scholar
- Solomon IH, Ganesh VS, Yu G, Deng XD, Wilson MR, Miller S, et al. Fatal case of chronic Jamestown Canyon virus encephalitis diagnosed by metagenomic sequencing in patient receiving rituximab. Emerg Infect Dis. 2021;27:238–42. DOIPubMedGoogle Scholar
- Varghese J, De Silva I, Millar DS. Latest advances in arbovirus diagnostics. Microorganisms. 2023;11:1159. DOIPubMedGoogle Scholar
- Business Wire. Delve Biol announces launch of its groundbreaking genomic infectious disease test, Delve Detect. 2024 [cited 2024 Dec 17]. https://www.businesswire.com/news/home/20241204755302/en/delve-bio-announces-launch-of-its-groundbreaking-genomic-infectious-disease-test-delve-detect
- Gowen BB, Wong MH, Jung KH, Sanders AB, Mendenhall M, Bailey KW, et al. In vitro and in vivo activities of T-705 against arenavirus and bunyavirus infections. Antimicrob Agents Chemother. 2007;51:3168–76. DOIPubMedGoogle Scholar
- Gowen BB, Wong MH, Jung KH, Smee DF, Morrey JD, Furuta Y. Efficacy of favipiravir (T-705) and T-1106 pyrazine derivatives in phlebovirus disease models. Antiviral Res. 2010;86:121–7. DOIPubMedGoogle Scholar
- Oestereich L, Rieger T, Neumann M, Bernreuther C, Lehmann M, Krasemann S, et al. Evaluation of antiviral efficacy of ribavirin, arbidol, and T-705 (favipiravir) in a mouse model for Crimean-Congo hemorrhagic fever. PLoS Negl Trop Dis. 2014;8:
e2804 . DOIPubMedGoogle Scholar - Tani H, Fukuma A, Fukushi S, Taniguchi S, Yoshikawa T, Iwata-Yoshikawa N, et al. Efficacy of T-705 (favipiravir) in the treatment of infections with lethal severe fever with thrombocytopenia syndrome virus. MSphere. 2016;1:e00061–15. DOIPubMedGoogle Scholar
- Morrey JD, Taro BS, Siddharthan V, Wang H, Smee DF, Christensen AJ, et al. Efficacy of orally administered T-705 pyrazine analog on lethal West Nile virus infection in rodents. Antiviral Res. 2008;80:377–9. DOIPubMedGoogle Scholar
- Livonesi MC, De Sousa RL, Badra SJ, Figueiredo LT. In vitro and in vivo studies of ribavirin action on Brazilian Orthobunyavirus. Am J Trop Med Hyg. 2006;75:1011–6. DOIPubMedGoogle Scholar
- Kapadia RK, Staples JE, Gill CM, Fischer M, Khan E, Laven JJ, et al. Severe arboviral neuroinvasive disease in patients on rituximab therapy: a review. Clin Infect Dis. 2023;76:1142–8. DOIPubMedGoogle Scholar
Page created: December 20, 2024
Page updated: January 22, 2025
Page reviewed: January 22, 2025
The conclusions, findings, and opinions expressed by authors contributing to this journal do not necessarily reflect the official position of the U.S. Department of Health and Human Services, the Public Health Service, the Centers for Disease Control and Prevention, or the authors' affiliated institutions. Use of trade names is for identification only and does not imply endorsement by any of the groups named above.