Epidemiologic and Genomic Surveillance of Vibrio cholerae and Effectiveness of Single-Dose Oral Cholera Vaccine, Democratic Republic of the Congo
Christine Marie George
1
, Alves Namunesha
1, Kelly Endres, Willy Felicien, Presence Sanvura, Jean-Claude Bisimwa, Jamie Perin, Justin Bengehya, Jean Claude Kulondwa, Ghislain Maheshe, Cirhuza Cikomola, Lucien Bisimwa, Alain Mwishingo, David A. Sack, and Daryl Domman
Author affiliation: Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland, USA (C.M. George, K. Endres, J. Perin, D.A. Sack); Université Catholique de Bukavu, Bukavu, Democratic Republic of the Congo (A. Namunesha, W. Felicien, P. Sanvura, J.-C. Bisimwa, G. Maheshe, C. Cikomola, L. Bisimwa, A. Mwishingo); Ministère de la Santé, Bukavu (J. Bengehya, J.-C. Kulondwa); University of New Mexico Health Sciences Center, Albuquerque, New Mexico, USA (D. Domman)
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Figure 2

Figure 2. Phylogenetic analysis of Vibrio cholerae seventh pandemic El Tor (7PET) isolates collected during study of V. cholerae transmission and effectiveness of single-dose oral cholera vaccine, Democratic Republic of the Congo. A) Maximum-likelihood tree of 255 7PET V. cholerae genomes sampled in Bukavu during 2020–2023. Node colors indicate sample type. Associated colored metadata indicate sampling year and inferred serotypes according to genome analysis. Scale bar indicates nucleotide substitutions per site. B) Minimum spanning tree of 255 7PET V. cholerae genomes sampled in Bukavu during 2020–2023. Node colors indicate sample type. Isolates with 0 single-nucleotide polymorphism differences between each other are collapsed into single node. Node sizes are scaled according to the number of samples. Scale bar indicates single-nucleotide polymorphisms.
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