Volume 32, Number 1—January 2026
Dispatch
Detection of Oropouche and Punta Toro Virus Infections by Enhanced Surveillance, Panama, 2023–2024
Table 2
Sequence analysis results from a study of detection of Oropouche and Punta Toro virus infections by enhanced surveillance, Panama, 2023–2024*
| Organism and segment | GenBank accession no. | Start position | End position | No. reads | Base coverage | Coverage, % | Mean depth of segment, reads, n | Mean base quality, % | Mean mapped read quality, % |
|---|---|---|---|---|---|---|---|---|---|
| Oropouche virus sample A003066 | |||||||||
| M | PP154171 | 1 | 4371 | 6,387 | 4,364 | 99.4 | 162.4 | 37.5 | 41.3 |
| S | PP154170 | 1 | 944 | 3,411 | 846 | 89.6 | 405.13 | 37 | 45.5 |
| L |
PP154172 |
1 |
6814 |
14,128 |
6,814 |
100 |
239.7 |
37.5 |
46.2 |
| Punta Toro virus sample A3416V2 | |||||||||
| S | KP272018 | 1 | 1899 | 217,265 | 1,899 | 100 | 18.609 | 37 | 48.2 |
| M | KP272017 | 1 | 4340 | 280,677 | 4,340 | 100 | 10.978 | 37 | 50.3 |
| L | KP272016 | 1 | 6407 | 877,321 | 6,407 | 100 | 23.679 | 37 | 51.2 |
*L, large; M, medium; S, small.
1These authors were co–principal investigators.
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