Skip directly to site content Skip directly to page options Skip directly to A-Z link Skip directly to A-Z link Skip directly to A-Z link
Volume 9, Number 3—March 2003
Research

New Lyssavirus Genotype from the Lesser Mouse-eared Bat (Myotis blythi), Kyrghyzstan

Yohko T. Arai*Comments to Author , Ivan V. Kuzmin†, Yosuke Kameoka*, and Alexandr D. Botvinkin‡
Author affiliations: *National Institute of Infectious Diseases, Tokyo, Japan; †Institute for Natural Foci Infections, Omsk, Russia; ‡Antiplague Research Institute of Siberia and the Far East, Irkutsk, Russia

Main Article

Table 2

Comparison of nucleotide and deduced amino acid sequences of Aravan virus with other 13 lyssaviruses

Amino acid sequence identity (%) Nucleotide sequence identity (%)
Genotype 1 (rabies virus)
 Genotype 2
 Genotype 3
 Genotype 4
 Genotype 5
 Genotype 6
 Genotype 7
Aravan SRL1032 U22479BRE U22628AFS U22644CHAD U22653THA AF351850 U27221 LBU22842 MKU22843 86132AS 8918FRA 9007FIN AF006497
Aravan
 100.0
 75.6
 76.0
 76.2
 74.8
 75.9
 77.0
 76.2
 74.3
 72.4
 78.2
 77.9
 77.2
 76.9
SRL1032
 90.9
 100.0
 84.7
 85.9
 86.9
 86.8
 86.6
 84.1
 74.2
 70.2
 73.9
 75.6
 74.7
 78.0
U22479BRE
 88.2
 95.3
 100.0
 83.3
 83.0a
 83.3
 89.9
 83.7
 73.8
 69.6
 73.8
 75.3
 74.2
 77.2
U22628AFS
 89.3
 96.7
 93.3b
 100.0
 85.6
 83.5
 83.6
 83.2
 73.3
 70.4
 73.9
 75.3
 74.6
 78.0
U22644CHAD
 88.7
 96.9
 93.1 b
 94.4
 100.0
 86.0
 84.0
 82.9a
 73.0
 69.0
 73.1
 75.0
 74.8
 77.2
U22653THA
 89.8
 97.1
 94.2
 95.1
 95.3
 100.0
 84.2
 82.8a
 73.4
 69.7
 74.4
 75.9
 74.7
 77.3
AF351850
 90.0
 97.1
 95.8
 95.8
 94.9
 95.6
 100.0
 86.1
 73.5
 70.1
 74.3
 75.0
 74.8
 77.4
U27221
 89.6
 95.8
 93.6
 94.2
 93.8
 94.9
 95.1
 100.0
 73.1
 70.2
 74.2
 74.6
 75.7
 77.1
LBU22842
 84.7
 82.9
 81.8
 81.1
 80.4
 81.8
 83.1
 82.2
 100.0
 74.8
 73.4
 74.4
 72.5
 72.6
MKU22843
 80.9
 78.2
 77.6
 77.3
 76.2
 77.6
 78.4
 77.8
 84.4
 100.0
 71.6
 69.9
 69.2
 71.0
86132AS
 91.8
 88.9
 86.9
 87.6
 87.1
 87.6
 88.7
 87.8
 85.8
 80.7
 100.0
 79.8c
 75.9
 77.0
8918FRA
 92.0
 88.9
 86.7
 87.8
 87.8
 88.4
 88.2
 88.2
 83.8
 79.1
 93.3d
 100.0
 78.0
 76.9
9007FIN
 88.9
 88.0
 86.2
 87.1
 86.9
 88.0
 87.3
 87.3
 79.1
 76.2
 86.2
 88.0
 100.0
 77.2
AF006497 92.0 93.1d 91.1 91.6 91.1 91.8 91.8 91.3 82.0 79.8 90.0 89.8 87.8 100.0

aThe values were shown as maximum variation of nucleotide sequence identities (%) within genotype 1.
bThe values were shown as maximum variation of amino acid sequence identities (%) within genotype 1.
cThresholds of nucleotide sequence identities % as different genotypes.
dThresholds of amino acid sequence identities % as different genotypes.

Main Article

Page created: December 07, 2010
Page updated: December 07, 2010
Page reviewed: December 07, 2010
The conclusions, findings, and opinions expressed by authors contributing to this journal do not necessarily reflect the official position of the U.S. Department of Health and Human Services, the Public Health Service, the Centers for Disease Control and Prevention, or the authors' affiliated institutions. Use of trade names is for identification only and does not imply endorsement by any of the groups named above.
file_external