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Volume 16, Number 4—April 2010
Dispatch

Sympatric Occurrence of 3 Arenaviruses, Tanzania

Joëlle Goüy de BellocqComments to Author , Benny Borremans, Abdul Katakweba, Rhodes Makundi, Stuart J.E. Baird, Beate Becker-Ziaja, Stephan Günther, and Herwig Leirs
Author affiliations: University of Antwerp, Antwerp, Belgium (J. Goüy de Bellocq, B. Borremans, H. Leirs); Sokoine University of Agriculture, Morogoro, Tanzania (A. Katakweba, R. Makundi); Research Center in Biodiversity and Genetic Resources, Vairão, Portugal (J. Goüy de Bellocq, S.J.E. Baird); Bernhard-Nocht-Institute for Tropical Medicine, Hamburg, Germany (B. Becker-Ziaja, S. Günther); University of Aarhus, Kongens Lyngby, Denmark (H. Leirs)

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Figure

Neighbor-joining tree of Old World arenaviruses, showing position of 2 arenaviruses found in blood samples of Lemniscomys rosalia and Mus minutoides mice (boldface), based on the analysis of partial sequences of the RNA polymerase gene. Phylogeny was estimated by neighbor-joining of amino acid pairwise distance in MEGA 4 (10). Numbers represent percentage bootstrap support (1,000 replicates). Two New World arenaviruses, Pirital and Pichinde, were used as outgroups. See Table 2 for virus strains

Figure. Neighbor-joining tree of Old World arenaviruses, showing position of 2 arenaviruses found in blood samples of Lemniscomys rosalia and Mus minutoides mice (boldface), based on the analysis of partial sequences of the RNA polymerase gene. Phylogeny was estimated by neighbor-joining of amino acid pairwise distance in MEGA 4 (10). Numbers represent percentage bootstrap support (1,000 replicates). Two New World arenaviruses, Pirital and Pichinde, were used as outgroups. See Table 2 for virus strains and GenBank accession numbers. Scale bar indicates amino acid substitutions per site. LCMV, lymphocytic choriomeningitis virus.

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References
  1. Charrel  RN, De Lamballerie  X, Emonet  S. Phylogeny of the genus Arenavirus. Curr Opin Microbiol. 2008;11:3628. DOIPubMedGoogle Scholar
  2. Briese  T, Paweska  JT, McMullan  LK, Hutchison  SK, Street  C, Palacios  G, Genetic detection and characterization of Lujo virus, a new hemorrhagic fever–associated arenavirus from southern Africa. PLoS Pathog. 2009;5:e1000455.5556.
  3. Lecompte  E, Fichet-Calvet  E, Daffis  S, Koulémou  K, Sylla  O, Kourouma  F, Mastomys natalensis and Lassa fever, West Africa. Emerg Infect Dis. 2006;12:19714.PubMedGoogle Scholar
  4. Johnson  KM, Taylor  P, Elliott  LH, Tomori  O. Recovery of a Lassa-related arenavirus in Zimbabwe. Am J Trop Med Hyg. 1981;30:12913.PubMedGoogle Scholar
  5. Wulff  H, McIntosh  BM, Hamner  DB, Johnson  KM. Isolation of an arenavirus closely related to Lassa virus from Mastomys natalensis in south-east Africa. Bull World Health Organ. 1977;55:4414.PubMedGoogle Scholar
  6. Günther  S, Hoofd  G, Charrel  R, Röser  C, Becker-Ziaja  B, Lloyd  G, Mopeia virus–related arenavirus in natal multimammate mice, Morogoro, Tanzania. Emerg Infect Dis. 2009;15:200812. DOIPubMedGoogle Scholar
  7. Leirs  H. Population ecology of Mastomys natalensis (Smith, 1834). Implications for rodent control in Africa. Agricultural ed. no. 35. Brussels: Belgian Administration for Development Cooperation; 1994.
  8. Vieth  S, Drosten  C, Lenz  O, Vincent  M, Omilabu  S, Hass  M, RT-PCR assay for detection of Lassa virus and related Old World arenaviruses targeting the L gene. Trans R Soc Trop Med Hyg. 2007;101:125364. DOIPubMedGoogle Scholar
  9. Hall  TA. Bioedit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser. 1999;41:958.
  10. Tamura  K, Dudley  J, Nei  M, Kumar  S. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol. 2007;24:15969. DOIPubMedGoogle Scholar
  11. Lecompte  E, ter Meulen  J, Emonet  S, Daffis  S, Charrel  RN. Genetic identification of Kodoko virus, a novel arenavirus of the African pigmy mouse (Mus Nannomys minutoides) in West Africa. Virology. 2007;364:17883. DOIPubMedGoogle Scholar
  12. Swanepoel  R, Leman  PA, Shepherd  AJ, Shepherd  SP, Kiley  MP, McCormick  JB. Identification of Ippy as a Lassa fever–related virus. Lancet. 1985;1:639. DOIPubMedGoogle Scholar
  13. Salvato  MS, Clegg  JCS, Buchmeier  MJ, Charrel  RN, Gonzales  JP, Lukashevich  IS, V: Family Arenaviridae. In: Van Regenmortel MHV, Fauquet CM, Mayo MA, Maniloff J, Desselberger U, Ball LA, editors. Virus taxonomy. Eighth report of the International Committee on Taxonomy of Viruses. San Diego (CA): Elsevier Academic Press;2005;725–38.
  14. Gonzalez  JP. Les arenavirus d’Afrique: un nouveau paradigme d’evolution. Bull Inst Pasteur. 1986;84:6785.
  15. Kiley  MP, Swanepoel  R, Mitchell  SW, Lange  JV, Gonzalez  JP, McCormick  JB. Serological and biological evidence that Lassa-complex arenaviruses are widely distributed in Africa. Med Microbiol Immunol (Berl). 1986;175:1613. DOIGoogle Scholar

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