Volume 16, Number 5—May 2010
Research
Historical Distribution and Molecular Diversity of Bacillus anthracis, Kazakhstan
Table 4
Isolate | KZ MLVA genotype | SNP group | SNPs |
||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A branch |
B branch |
||||||||||||||
001 | 002 | 003 | 004 | 006 | 007 | 008 | 009 | 001 | 002 | 003 | 004 | ||||
KZ 6 | 1 | A.Br.008/009 | T | G | A | T | A | T | G | A | T | G | G | T | |
KZ 60 | 2 | A.Br.008/009 | T | G | A | T | A | T | G | A | T | G | G | T | |
KZ 52 | 3 | A.Br.008/009 | T | G | A | T | A | T | G | A | T | G | G | T | |
KZ 3 | 4 | A.Br.008/009 | T | G | A | T | A | T | G | A | T | G | G | T | |
KZ 44 | 4 | A.Br.008/009 | T | G | A | T | A | T | G | A | T | G | G | T | |
KZ 1 | 5 | A.Br.008/009 | T | G | A | T | A | T | G | A | T | G | G | T | |
KZ 74 | 6 | A.Br.008/009 | T | G | A | T | A | T | G | A | T | G | G | T | |
KZ 25 | 7 | A.Br.008/009 | T | G | A | T | A | T | G | A | T | G | G | T | |
KZ 55 | 7 | A.Br.008/009 | T | G | A | T | A | T | G | A | T | G | G | T | |
KZ 8 | 8 | A.Br.008/009 | T | G | A | T | A | T | G | A | T | G | G | T | |
KZ 13 | 9 | A.Br.008/009 | T | G | A | T | A | T | G | A | T | G | G | T | |
KZ 11 | 10 | A.Br.Vollum | T | G | A | T | A | C | T | A | T | G | G | T | |
KZ 42 | 11 | A.Br.Ames | C | A | G | C | A | T | T | A | T | G | G | T | |
KZ 66 | 12 | A.Br.Ames | C | A | G | C | A | T | T | A | T | G | G | T | |
KZ ST1 | NA | A.Br.008/009 | T | G | A | T | A | T | G | A | T | G | G | T |
*SNP, single nucleotide polymorphism; KZ, Kazakhstan; MLVA, multilocus variable number tandem repeats; NA, not applicable. SNP changes are shaded. SNP groups as described in Van Ert et al. (10).
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1Current affiliation: Republican Sanitary Epidemiologic Station, Almaty, Kasakhstan.
2Current affiliation: VEN Consulting, LLC, Melbourne, Florida, USA.
3Current affiliation: University of Florida, Gainesville, Florida, USA.
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